Sequence ID | ||
Sequence Length | 674 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | - | |
Gbrowse Vvi | - | |
Gbrowse Ath | - | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_011140 (Contig08213) |
>Contig08213 CACGAGGTATACGGCGGGGTATAGTAATGCTGCAGTGTGCAACTGGTCAATTCCCATATTCTCCGCCAGACCGGAGTGAA GACTGGGCTAGCGTTTATCAACTTGTGGCAGCTATTGTAAAGCAACCAGAACCTTGTGCACCCTCTGATCAATTTTCCCC AGAGTTTTGCTCATTCATATCTTCATGTCTGCAGAAAGACCCAACAAAAAGATGGTCAGCACGTGACCTTCTGGAACATC CATTCATGATCAGGTATGGCGACCTGCAAGCAGAAGCCCTCAAATCTTACTTCACAAACGCAGGCTCTCCAGAAACTTCT AGTAAGTAAGTATGATCAGACAGCTCTACTTCAAGAACTGGCTAAAGAATGTTTACCACTACTTCGAATTGCAAAGCATC TGCCATATCAACACAGCTAAAGCATCTCCTCGTGGGTGTTTTCTACCTTATATATATGTGTGTATTCTATGAATTTGTTG CTCAAGAAAGACAGGGCCACAAAAAATCTATCAATCAGGCATCGAATCTATCTTTGTATTAAAATCGCTAGGTTTCTATT TATCAACTGTTGAATATTATAGTGCCCTGATCCGCATTGATAAACAGGTGTCTTATTTGTAAAACAATATGCGTAGCTTT ATTTTTCGTCAAGATAATAAAAATTTTCATTTAG |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | gb|ACY82515.1| mitogen-activated protein kinase kinase [Malus x domestica] | 140 | 2e-31 |
Manihot esculenta | blastn | cassava4.1_010246m|PACid:17986592 | 613 | 1e-175 |
FGENESH CDS | blastn | scaffold09809_FGENESH24 9 exon (s) 552716 - 555401 1143 bp, chain + | 605 | 1e-172 |
Arabidopsis thaliana | blastx | AT4G26070.3 | Symbols: MEK1, NMAPKK, ATMEK1, MKK1 | MAP kinase/ ERK kinase 1 | chr4:13217797-13219695 FORWARD LENGTH=354 | 127 | 5e-30 |
Populus trichocarpa | blastx | POPTR_0018s05420.2|PACid:18214792 | 131 | 4e-31 |
Vitis vinifera | blastx | GSVIVT01015155001|PACid:17825956 | 135 | 2e-32 |
Ricinus communis | blastx | 29912.m005307|PACid:16813186 | 117 | 4e-27 |
InterProScan |
GO:0004672
Molecular Function protein kinase activity |
GO:0005524
Molecular Function ATP binding |
GO:0006468
Biological Process protein amino acid phosphorylation |
Sequence: Contig08213_1_ORF2 Length: 56 aa | |
No hits reported. |
Sequence: Contig08213_1_ORF3 Length: 50 aa | |
No hits reported. |
Sequence: Contig08213_3_ORF1 Length: 108 aa | |||||||||||||
InterPro IPR000719 Domain |
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InterPro IPR011009 Domain |
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InterPro IPR017442 Domain |
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noIPR unintegrated |
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Sequence: Contig08213_3_ORF2 Length: 58 aa | |
No hits reported. |