Home > Keyword search > Contig07881

Summary
Sequence ID 
Sequence Length 177 nucleotides
Gbrowse Mes 
Gbrowse Rco  Mapped
Gbrowse Ptr  Mapped
Gbrowse Vvi  Mapped
Gbrowse Ath  -
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_010897 (Contig07881)
 
 
Sequence
>Contig07881
CAGCAAATTACTGGGTTTTAGATCCCTATGAATAATATTAGCCGAGTGTATGTATTTCAGTCCTCGGAGAATCTGATACA
GGAAGTACTGACAATGCTCCTCTGATAAACCTTGGTTGGAGCGTATAATCTGATGAAGATCAGTATCCATGAGCTCCGTG
GCAATGTAGACATCAGT

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  emb|CAA73323.1| MAP kinase I [Petroselinum crispum] 122 2e-26
  Manihot esculenta blastn - - -
  FGENESH CDS blastn - - -
  Arabidopsis thaliana blastx  AT3G45640.1 | Symbols: ATMPK3, MPK3, ATMAPK3 | mitogen-activated protein kinase 3 | chr3:16756918-16758476 FORWARD LENGTH=370 117 2e-27
  Populus trichocarpa blastx  POPTR_0009s07050.1|PACid:18228123 120 2e-28
  Vitis vinifera blastx  GSVIVT01025105001|PACid:17833161 121 8e-29
  Ricinus communis blastx  29688.m000269|PACid:16805869 118 7e-28
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
Sequence: Contig07881_4_ORF1  Length: 59 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[2-59]T 7e-27 PD000001 Q84XZ7_PETCR_Q84XZ7;Q84XZ7_PETCR_Q84XZ7;
PS50011[1-59]T 17.234 PS50011 PROTEIN_KINASE_DOMPROTEIN_KINASE_DOM
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[3-59]T 1.1e-19 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[1-59]T 6.1e-22 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
G3DSA:1.10.510.10[1-59]T 7.2e-17 G3DSA:1.10.510.10 no descriptionno description
PTHR11295[2-59]T 6.6e-46 PTHR11295 CDC2, MAP KINASE-RELATEDCDC2, MAP KINASE-RELATED
PTHR11295:SF69[2-59]T 6.6e-46 PTHR11295:SF69 MITOGEN-ACTIVATED PROTEIN KINASE 7 (ERK5)-RELATEDMITOGEN-ACTIVATED PROTEIN KINASE 7 (ERK5)-RELATED