Sequence ID | ||
Sequence Length | 780 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | - | |
Gbrowse Ath | - | |
Transcript scaffold composed of the full-length cDNA(s) | Scaffold07970 | |
Probe ID of RIKEN ver.1 microarray | - |
>Contig07673 CTTGTGACCTCTGTTCTCTGTTTTCTTTCCTTCGAAGAAACCGAACCAAAACCCAACAAGGAGGAGAACAACTCTCAACT CCTCTCTTTCTAAATCATCTACTTGATCTGCTTACTCTTCTTTCTCCCATGGATTGGGTTCGCGGAGATTCCATTGATTG TGGGAGCTTTTCCACTGTAAATTTGGCAATTCCCACGAAAACCTCTTCTCCTTTAATGGCGGTGAAATCTTGTGATCTTT TTTACTCTTCTTTGCTTGAGAATGAAAAGGATGTTTTGAATCAGCTTGGCAATTGCGAGCATATAATCAAGTGTTTCGGC GGCGATCAGAGTGTGGAAAACGGTCAGAGGTTGTATAACTTGCTATTGGAGTATGCCCCTGGTGGCAGTTTATCTCGTTT GGTGAAGAATTCTGGTGGTTGCTTGCCGGAATCAGATGCCAGACGCTACACCAAATCGATACTAAAGGGTCTTCGTTATA TTCACGCAAAAGGGTTTGCTCACTGTGACATAAAGCTTCAAAATATCTTGTTGTTTGAGGATGGGGACGTGAAGATTGCA GACTTTGGATTAGCCAAGAAAACAGGGGAAGAACAGAGTGATGAACAGGGGAGAGTGGAAATTCGAGGAACTCCTCTGTA CATGTCCCCAGAATCAGTCAACGAAAACGAGTACGATTCACCGTGTGATATTTGGGCTCTTGGGTGTGGGTTGGTGGAGA TGGTGACCGGAAAACCGGCCTGGAACTGCAAGCCGGAATCAAACATCGCATCCTTGTTGA |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002523600.1| ATP binding protein, putative [Ricinus communis] gb|EEF38795.1| ATP binding protein, putative [Ricinus communis] | 332 | 5e-89 |
Manihot esculenta | blastn | cassava4.1_010778m|PACid:17992966 | 1277 | 0.0 |
FGENESH CDS | blastn | scaffold03060_FGENESH37 2 exon (s) 304624 - 305905 1128 bp, chain + | 1277 | 0.0 |
Arabidopsis thaliana | blastx | AT3G50310.1 | Symbols: MAPKKK20 | mitogen-activated protein kinase kinase kinase 20 | chr3:18648296-18649324 REVERSE LENGTH=342 | 251 | 5e-67 |
Populus trichocarpa | blastx | POPTR_0005s18230.1|PACid:18208980 | 284 | 5e-77 |
Vitis vinifera | blastx | GSVIVT01022117001|PACid:17831030 | 225 | 2e-59 |
Ricinus communis | blastx | 30115.m001222|PACid:16818001 | 332 | 2e-91 |
InterProScan |
GO:0004672
Molecular Function protein kinase activity |
GO:0005524
Molecular Function ATP binding |
GO:0006468
Biological Process protein amino acid phosphorylation |
Sequence: Contig07673_1_ORF2 Length: 50 aa | |
No hits reported. |
Sequence: Contig07673_3_ORF1 Length: 259 aa | ||||||||||||||||
InterPro IPR000719 Domain |
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InterPro IPR001245 Domain |
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InterPro IPR002290 Domain |
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InterPro IPR008271 Active_site |
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InterPro IPR011009 Domain |
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InterPro IPR017442 Domain |
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noIPR unintegrated |
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Sequence: Contig07673_4_ORF2 Length: 116 aa | |
No hits reported. |
Sequence: Contig07673_4_ORF3 Length: 64 aa | |
No hits reported. |
Sequence: Contig07673_5_ORF1 Length: 86 aa | |||||||
noIPR unintegrated |
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