Sequence ID | ||
Sequence Length | 995 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | Mapped | |
Gbrowse Ath | Mapped | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_010037 (Contig06767) |
>Contig06767 CCCACTTCTGGTTAGTTTCTGCGAAAATAAAGGGACCAGAAGGCACCAATGGCTACAATTTTCCGTGGATTAGGAGCTGC TACGGCTTTAACGGCTTCTAATTCCTTCGATTTTAAGAAATTACAGCTCACCTCTCCCAGATCCTTTTCGGAGAGAAAGG CGAGCCTTCTCGTGGTCAGATCTGATGGGAGCGGGAACCTCAACCTAGGTTTTGATTCAAGAACTCGCAGGGCCGAGCAG TTGATTACCAATGCTGTTGCGACGAAGGCTGAGAATTCTGCCGCTTCCTCGGCAGCTAAATCTGGACATGAACTTCTACT CTTTGAGGCCCTAAGAGAAGGCTTGGAAGAAGAAATGGACAGAGATCCCACTGTTTGTGTCATGGGCGAAGATGTGGGTC ATTATGGAGGTTCTTACAAGGTGACGAAAGGCCTGGCAAATAAATATGGGGATCTCAGAGTCCTTGATACCCCTATTGCT GAGAACTCATTCACTGGTATGGGTATAGGTGCTGCCATGACTGGCTTGAGGCCAGTTGTTGAGGGTATGAACATGGGGTT TCTCCTTCTAGCTTTCAATCAGATCTCAAATAACTGTGGCATGCTTCACTACACATCAGGTGGACAGTTTAAAATACCCA TAGTTATTCGTGGACCTGGTGGAGTTGGGCGGCAACTGGGTGCTGAGCACTCACAACGCCTTGAATCATATTTTCAATCA ATTCCTGGAATCCAAATGGTTGCATGCTCAACCCCTTATAATGCCAAGGGCTTGATGAAAGCAGCAATCCGAAGTGAGAA CCCAGTGATACTTTTTGAACATGTTTTGCTTTACAACCTCAAGGAGAGAATCCCTGATGAAGAATATATCTGTAATCTTG AGGAAGCTGAGATTGTTAGGCCTGGAGAGCATGTCACTATTTTAACCTACTCAAGGATGAGATATCATGTGATGCACGCT GCCAAAACTTTAGTGAACAAAGGGATATGATCCTG |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002519664.1| pyruvate dehydrogenase, putative [Ricinus communis] gb|EEF42637.1| pyruvate dehydrogenase, putative [Ricinus communis] | 561 | 1e-158 |
Manihot esculenta | blastn | cassava4.1_008778m|PACid:17972265 | 1798 | 0.0 |
FGENESH CDS | blastn | scaffold03859_FGENESH19 6 exon (s) 172069 - 176001 1401 bp, chain + | 1338 | 0.0 |
Arabidopsis thaliana | blastx | AT2G34590.1 | Symbols: | Transketolase family protein | chr2:14568956-14570844 REVERSE LENGTH=406 | 494 | 1e-140 |
Populus trichocarpa | blastx | POPTR_0017s11290.1|PACid:18210740 | 540 | 1e-154 |
Vitis vinifera | blastx | GSVIVT01026353001|PACid:17834089 | 392 | 1e-109 |
Ricinus communis | blastx | 29693.m001991|PACid:16805961 | 561 | 1e-160 |
InterProScan |
GO:0003824
Molecular Function catalytic activity |
GO:0008152
Biological Process metabolic process |
Sequence: Contig06767_1_ORF2 Length: 319 aa | |||||||||||||||||||
InterPro IPR005475 Domain |
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InterPro IPR005476 Domain |
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noIPR unintegrated |
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Sequence: Contig06767_4_ORF2 Length: 57 aa | |
No hits reported. |
Sequence: Contig06767_4_ORF3 Length: 51 aa | |
No hits reported. |
Sequence: Contig06767_5_ORF2 Length: 64 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig06767_6_ORF2 Length: 54 aa | |
No hits reported. |
Sequence: Contig06767_6_ORF3 Length: 128 aa | |||||||
noIPR unintegrated |
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