Sequence ID | ||
Sequence Length | 776 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | Mapped | |
Gbrowse Ath | Mapped | |
Transcript scaffold composed of the full-length cDNA(s) | Scaffold07758 Scaffold07759 | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_006102 (Scaffold07758) R_Mes01_006103 (Scaffold07759) |
>Contig06586 TGAAGTGGCACCCTACGATTCGAGAATCCTCAAGCTTTCTTATCCAGACACTGAAAAACCGAGATTTCTGTCTAGAGTTT CATTTCGTTAGAGATGAACGGCGGCGATGCTTACGGTGCTGTGGAGGCACAGTACATACGTAGACACCATAGACACCAGC CTAGAGAGAACCAGTGCACTTCTACTCTTGTCAAGCACATTAAAGCTCCTGTTCATCTTGTGTGGTCACTGGTGAGGCGA TTCGATCAGCCACAGAAATACAAGCCATTTGTGAGTAGGTGCGTTGTGAATGGGGAGAGTGGGGAGCCTGGGATTGGAAG TGTCAGGGAAGTCAATGTTAAATCTGGACTCCCCGCTACCACTAGCACCGAGAGGCTGGAACTCCTTGATGATGAGGAGC ACATTCTTGGAATCAAGATTGTTGGTGGTGATCATAGGCTTAAGAACTACTCGTCTATCATGACTGTCCATCCAGAGATT GTTGATGGAAGGCCTGGAACGTTGGTCATAGAGTCGTTTGTGGTGGATGTGCCTGATGGGAACACCAAGGATGAGACATG TTACTTTGTGAAGGCACTCATCAAGTGCAATCTCAAATCTCTGGCTGATGTCTCTGAGAGGATGGCAGTGCAGGACCGAG TTGAACCCATCAACCGGTTCTGAATAGGTGGTTTCTGAATATGTGATGATGGTCTATTAGGATGGCTGTTCCTTTCGAGG GTTCTAATTCCAGGGGCTTTGTAGAGATTGATGGGAGTACTCCACTATTCCCAGAA |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002523369.1| conserved hypothetical protein [Ricinus communis] gb|EEF39085.1| conserved hypothetical protein [Ricinus communis] | 350 | 1e-94 |
Manihot esculenta | blastn | cassava4.1_017001m|PACid:17978517 | 1106 | 0.0 |
FGENESH CDS | blastn | scaffold03581_FGENESH95 3 exon (s) 754535 - 756689 573 bp, chain + | 724 | 0.0 |
Arabidopsis thaliana | blastx | AT1G01360.1 | Symbols: RCAR1, PYL9 | regulatory component of ABA receptor 1 | chr1:142138-142914 FORWARD LENGTH=187 | 300 | 9e-82 |
Populus trichocarpa | blastx | POPTR_0014s09280.1|PACid:18224353 | 350 | 7e-97 |
Vitis vinifera | blastx | GSVIVT01019517001|PACid:17829125 | 316 | 9e-87 |
Ricinus communis | blastx | 29742.m001442|PACid:16807672 | 350 | 3e-97 |
InterProScan |
GO:0006952
Biological Process defense response |
GO:0009607
Biological Process response to biotic stimulus |
Sequence: Contig06586_1_ORF1 Length: 195 aa | |||||||
InterPro IPR000916 Family |
| ||||||
noIPR unintegrated |
|
Sequence: Contig06586_2_ORF2 Length: 57 aa | |
No hits reported. |
Sequence: Contig06586_4_ORF2 Length: 155 aa | |
No hits reported. |
Sequence: Contig06586_6_ORF2 Length: 67 aa | |
No hits reported. |
Sequence: Contig06586_6_ORF3 Length: 61 aa | |||||||
noIPR unintegrated |
|