Summary
| Sequence ID |
| |
| Sequence Length | 715 nucleotides | |
| Gbrowse Mes | ||
| Gbrowse Rco | - | |
| Gbrowse Ptr | - | |
| Gbrowse Vvi | - | |
| Gbrowse Ath | - | |
| Transcript scaffold composed of the full-length cDNA(s) | Scaffold07369 | |
| Related probe ID of RIKEN ver.1 microarray | R_Mes01_005785 (Scaffold07369) |
| >Contig06157 GAAGATAACCTACTTTCGTCTTCAGATCTGCTCGCAAACCCATCGTCAAGATCCAATTTTGCTTATTTCGATCACTTTGC TTCTTCACTTACAGAGAAATTAATAATGGATTCTGAGCAGCGCCGGAAGCGGAAGCGTATATACAAATCCCATGCCAACT TCTTTTCTGCGAAGTCTTTAACTGTTTGCTTGTCTTTCTTCGCCTTTCTCCTATTCATTTCTTCAGATCGCTCGCCTATT CGTACTGGGTCGTTTCGGCCAGTGCTTTCCGTACCCACTTCATTGTCGCTTTTGCCTACCCGTCTAGCTTTAACTCGAGA TTCTTTTGATGCTAGATCCTTGTCTTTGGTTGTGGAAGATAGGGTTTTGTTGCCTGATCACTTGCTGCTAATCGTTTCTA ATAAACTCCATAACACTGAAAATTTGTACTGTGTTTACTATAGTTTATTAAATTCTTCGTCCTCTGTGGATGTGGTTTTA AAGCCGACTTTATTTGTTGATGAGTATCGTGAGGCCAAGTCCATTGTAAGGTGCCAGCTTCCACCGACGAATTTTTCAGC CGCCGTTGACTTGCGGCGTACTTGGGAGCTGGCAGAAGGTGATGGGCTCTTGCGGAGTAATGCGGACTCGGCGGTTCCTT CATGGGAAAGAGTGGTATATGAAGCTGTGTTAGATTTGAACACAGCGGTTGTGTTCGTCAAAGGATTGAATCTTC |
| vs DB | Program | Description | Score | |
|---|---|---|---|---|
| NCBI nr | blastx | ref|XP_002520193.1| ubiquitin-protein ligase, putative [Ricinus communis] sp|B9S2H4.1|Y232_RICCO RecName: Full=UPF0392 protein RCOM_0530710 gb|EEF42248.1| ubiquitin-protein ligase, putative [Ricinus communis] | 254 | 1e-65 |
| Manihot esculenta | blastn | cassava4.1_034265m|PACid:17988325 | 1209 | 0.0 |
| FGENESH CDS | blastn | scaffold11495_FGENESH104 1 exon (s) 754250 - 755995 1746 bp, chain - | 1209 | 0.0 |
| Arabidopsis thaliana | blastx | AT1G27200.1 | Symbols: | Domain of unknown function (DUF23) | chr1:9449812-9451539 REVERSE LENGTH=575 | 114 | 5e-26 |
| Populus trichocarpa | blastx | POPTR_0008s19630.1|PACid:18248172 | 187 | 7e-48 |
| Vitis vinifera | blastx | GSVIVT01020134001|PACid:17829611 | 149 | 1e-36 |
| Ricinus communis | blastx | 29736.m002092|PACid:16807197 | 254 | 4e-68 |
| InterProScan |
| No hits found |
| Sequence: Contig06157_1_ORF1 Length: 238 aa | |||||||
| noIPR unintegrated |
| ||||||
![[4-18]? NA seg seg](http://pmix.psc.riken.jp/img/interpro/G.gif){kind=small}
| Sequence: Contig06157_3_ORF2 Length: 70 aa | |
| No hits reported. | |
| Sequence: Contig06157_5_ORF2 Length: 99 aa | |
| No hits reported. | |
| Sequence: Contig06157_6_ORF1 Length: 91 aa | |
| No hits reported. | |
| Sequence: Contig06157_6_ORF2 Length: 101 aa | |
| No hits reported. | |
