Sequence ID | ||
Sequence Length | 543 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | - | |
Gbrowse Vvi | - | |
Gbrowse Ath | - | |
Transcript scaffold composed of the full-length cDNA(s) | Scaffold06746 Scaffold07225 | |
Probe ID of RIKEN ver.1 microarray | - |
>Contig06032 GGGTGTGGACTGGCGAAACGGAGAGAGTTTTGTTTTTTCTTTTTTTTTTTTTTGATTTTTTTTGCCCCTCCTCGTTTTTA ATGGAGTACGGTGGCTGGGAAACGACGGCGGGGAAGACTAAAACGGCAACGCCTAATAGCTGGGCACAGCAGACGGAAGA GAGTTACCAGCTGCAGCGGGCGCTAGCTTTGAGGTTGTCTTCTCAAGCAGCTTTAGCTAATGATCCTAATTTCTTGGTTT TCAAATCCGATGATCGTTTAGGAGGAATCGATTCTTTCTCTGATTCTGCTGAAGCCGTTTCTCATCGATTTTGGGTAAAT GGAAGTCTCACTTACTTTGACAAAATCCCAGATGGGTTTTATCTAATCCATGGGGTGGATCCTTATGCTTGGACTTTAAG TACAGATCAGCAAGATATTGGCCTGGACCCATCTTTTGAATCCTTAAAGGCGCTTGATCCTTGTGCTGATTTATCAATAA AAGTGGTTTCAGTTGACAGATTCAGGGATCCTGGTCTGAAAGAGCTGCTCAATAGTGTTATTA |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002530885.1| map3k delta-1 protein kinase, putative [Ricinus communis] gb|EEF31491.1| map3k delta-1 protein kinase, putative [Ricinus communis] | 219 | 1e-55 |
Manihot esculenta | blastn | cassava4.1_003345m|PACid:17978355 | 910 | 0.0 |
FGENESH CDS | blastn | scaffold04116_FGENESH9 14 exon (s) 123695 - 130076 2058 bp, chain - | 910 | 0.0 |
Arabidopsis thaliana | blastx | AT5G03730.1 | Symbols: CTR1, SIS1, AtCTR1 | Protein kinase superfamily protein | chr5:974958-979660 REVERSE LENGTH=821 | 155 | 2e-38 |
Populus trichocarpa | blastx | POPTR_0010s24110.1|PACid:18239640 | 178 | 3e-45 |
Vitis vinifera | blastx | GSVIVT01034710001|PACid:17840095 | 167 | 2e-42 |
Ricinus communis | blastx | 29428.m000323|PACid:16802839 | 219 | 5e-58 |
InterProScan |
No hits found |
Sequence: Contig06032_3_ORF1 Length: 180 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig06032_4_ORF1 Length: 57 aa | |
No hits reported. |
Sequence: Contig06032_5_ORF2 Length: 54 aa | |||||||
noIPR unintegrated |
|