Sequence ID | ||
Sequence Length | 624 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | Mapped | |
Gbrowse Ath | Mapped | |
Transcript scaffold composed of the full-length cDNA(s) | Scaffold06978 Scaffold06979 | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_005475 (Scaffold06978) R_Mes01_005476 (Scaffold06979) |
>Contig05820 GAACGTAGTTTGGTGTCTGGAGGAGGAGAAAAACAAAGGGATAGAGATTAGAGAGCGCTTTGTACATAATCTTCTTCTTG CTTCTTGCTTCTTGCTTCTTGTTTGTTTTTTCTTGTTGTTGTATAGAACAGTGGTTACTCGTATAAGCCGCCGCCTATGG CCACAAGAGGGTTGGTATTGTATTTGCTGTCGGGTTTTTCTGTGGCTGTTCTCTCTACAATCATCTTCGTCGATAAAAAT GCCGGAGACCCCTCAAACAACATCTTACTCAGTTCTCCTCACATGTCCACAACCGAAAAAGTTTGGCCAAAATTGGAGCT TAGTTGGAGACTAGCGTTGGCTACGGTGATAGGATTTCTGGGATCGGCATGTGGAACTGTAGGCGGCGTTGGTGGCGGAG GCATTTTCGTGCCTATGCTTACTTTGATTGTTGGATTTGATACCAAGTCTGCTGCTGCCATCTCCAAATGTATGATCATG GGGGCATCAGCTTCATCAGTTTGGTACAATTTAAGAGTGCCTCATCCAACAAAGGAAGTGCCCATTATAGACTATGATTT AGCTCTTCTCTTTCAGCCCATGCTTATGCTTGGCATCACCATTGGTGTTGCCTTGAGTGTTGTC |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ef|XP_002326235.1| predicted protein [Populus trichocarpa] >gi|... 250 1e-64 >ref|XP_002326235.1| predicted protein [Populus trichocarpa] gb|EEE71905.1| predicted protein [Populus trichocarpa] | 250 | 1e-64 |
Manihot esculenta | blastn | cassava4.1_007299m|PACid:17975524 | 912 | 0.0 |
FGENESH CDS | blastn | scaffold10247_FGENESH1 12 exon (s) 2333 - 4965 1377 bp, chain + | 912 | 0.0 |
Arabidopsis thaliana | blastx | AT2G36630.1 | Symbols: | Sulfite exporter TauE/SafE family protein | chr2:15352767-15355050 REVERSE LENGTH=459 | 223 | 8e-59 |
Populus trichocarpa | blastx | POPTR_0006s11920.1|PACid:18213888 | 250 | 7e-67 |
Vitis vinifera | blastx | GSVIVT01033741001|PACid:17839399 | 241 | 2e-64 |
Ricinus communis | blastx | 29815.m000496|PACid:16809552 | 248 | 1e-66 |
InterProScan |
No hits found |
Sequence: Contig05820_1_ORF2 Length: 166 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig05820_2_ORF1 Length: 110 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig05820_4_ORF2 Length: 51 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig05820_4_ORF3 Length: 84 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig05820_5_ORF2 Length: 51 aa | |
No hits reported. |
Sequence: Contig05820_6_ORF2 Length: 80 aa | |||||||
noIPR unintegrated |
|