Sequence ID | ||
Sequence Length | 744 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | Mapped | |
Gbrowse Ath | Mapped | |
Transcript scaffold composed of the full-length cDNA(s) | Scaffold01034 Scaffold05684 | |
Related probe ID of RIKEN ver.1 microarray | - (Scaffold01034) R_Mes01_004434 (Scaffold05684) |
>Contig04687 GATGTGTGCAATAAAAGAAGTCAGAGTGAAAGAGGATGATCAGACGTCAAAAGAAGCTGCTAAGCAGCTGAACCAGGAAA TAAACTTGCTTAGTCAGCTTTCACATCCAAACATCGTCCGATATCATGGAAGTGAACTGAGTGAAGAAACACTTTCAGTT TATTTAGAGTATGTCTCTGGTGGCTCCATTCACAAATTACTTCAAGAATATGGTGCCTTCAAGGAACCTGTCATTCAAAA TTATACCAGGCAGATCCTTTGTGGGCTTGCTTATTTGCATGGAAGAAATACTGTCCACAGGGATATCAAAGGGGCCAACA TATTAGTAGATCCTAATGGTGAAATCAAGCTGGCTGACTTTGGCATGGCCAAACATATTACATCCTGTTCTTCAATTCTT TCATTCAAGGGAAGTCCTTACTGGATGGCACCTGAGGTGGTAATGAATACAAATGGCTATAGTCTTGCAGTGGATATTTG GAGCTTGGGATGTACAATTCTTGAAATGGCAACATCAAAACCGCCATGGAACCAATATGAAGGGGTGAGCTTTTGAAAAT TTTGTAACTTATATCACCTTTGTCATGTGCATCTTTAAAGTCTTTTTAGGACCAAAGTCATTTAATCATGTTCGATTTAA CAGGTAGCTGCAATATTCAAAATTGGAAACAGCAAAGATATGCCTGATATACCTGATCACCTGTCAAATGATGCAAAAGG TTTTATAAAGTTGTGCTTGCAGCG |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002529731.1| mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative [Ricinus communis] gb|EEF32660.1| mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative [Ricinus communis] | 395 | 1e-108 |
Manihot esculenta | blastn | cassava4.1_005325m|PACid:17973662 | 995 | 0.0 |
FGENESH CDS | blastn | scaffold06948_FGENESH71 12 exon (s) 692141 - 696652 2208 bp, chain - | 995 | 0.0 |
Arabidopsis thaliana | blastx | AT1G53570.4 | Symbols: MAP3KA | mitogen-activated protein kinase kinase kinase 3 | chr1:19987391-19990733 FORWARD LENGTH=608 | 367 | 1e-102 |
Populus trichocarpa | blastx | POPTR_0005s06330.1|PACid:18208825 | 383 | 1e-107 |
Vitis vinifera | blastx | GSVIVT01026487001|PACid:17834182 | 373 | 1e-104 |
Ricinus communis | blastx | 29691.m000286|PACid:16805903 | 395 | 1e-111 |
InterProScan |
GO:0004672
Molecular Function protein kinase activity |
GO:0005524
Molecular Function ATP binding |
GO:0006468
Biological Process protein amino acid phosphorylation |
Sequence: Contig04687_1_ORF2 Length: 63 aa | |
No hits reported. |
Sequence: Contig04687_2_ORF1 Length: 184 aa | ||||||||||
InterPro IPR000719 Domain |
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InterPro IPR001245 Domain |
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InterPro IPR002290 Domain |
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InterPro IPR011009 Domain |
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InterPro IPR015748 Domain |
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InterPro IPR017442 Domain |
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noIPR unintegrated |
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Sequence: Contig04687_3_ORF2 Length: 52 aa | |
No hits reported. |
Sequence: Contig04687_6_ORF2 Length: 66 aa | |
No hits reported. |