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Summary
Sequence ID 
Sequence Length 673 nucleotides
Gbrowse Mes 
Gbrowse Rco  Mapped
Gbrowse Ptr  Mapped
Gbrowse Vvi  Mapped
Gbrowse Ath  -
Transcript scaffold composed of the full-length cDNA(s)  Scaffold02634
Related probe ID of RIKEN ver.1 microarray  R_Mes01_002018 (Scaffold02634)
 
 
Sequence
>Contig02046
AAAAAGCAAATATGTCTACATGGTATACATTTGCATATGTCATTTGTAAGCTTACAACATCCCAAAAGAGGAAGCTTGGT
TATCATGACAGTACTACAATACATATTAGATATTCTAAATACAACAAATGTTTTCCCATAAATCTTACATCGGCACACCT
ATTTACAAACTGACAGGGCCACATAAATTTCAGAGCTGAAGCTCATCAATAAGCCCTTGAGAACTGAAGTTAGTTAAATC
ATGCATCCATGGCATACATGACTGGTGCATGCTTCATTAAGATTATTAAGGGACAACAGTGGACACGAGTAAAACAACAA
CAGAAACTAAATGTTACCACAACAAAAACTTCCTCAGTTTATAGAAGACTACTATCCCTCTCAGGCGCCTAAGAACTACG
GAACCAGATCAGGCACACATCTGCCCGTTGGCTGTACCTTCTTCAGGATGGTAATGGAGGATCTCCTTCAACATCATCTC
CCGAATCATGTCCTCGCCTAAATCCTCATCTATGTCGAGATCAATAGGGGACCTGTGCTGGGGGATTGCTGCTGGGATCA
TAAAGTGGGGACATGTAAGGGTGTTGGAGTGCTTCAGTTACAGTTATTCTCTTTGAATTTGCAAAAACAAGCATTTTACC
AAGCAGCATGGTTGCCAAAGGATGGGCATTAGG

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  dbj|BAE96757.1| MAP kinase homolog [Nicotiana tabacum] 69.7 1e-19
  Manihot esculenta blastn  cassava4.1_009941m|PACid:17969422 430 1e-120
  FGENESH CDS blastn  scaffold10524_FGENESH19 2 exon (s) 174185 - 177150 1119 bp, chain + 430 1e-120
  Arabidopsis thaliana blastx  AT1G10210.2 | Symbols: ATMPK1, MPK1 | mitogen-activated protein kinase 1 | chr1:3349579-3350776 FORWARD LENGTH=370 77.8 6e-15
  Populus trichocarpa blastx  POPTR_0005s25270.2|PACid:18208046 84.0 1e-16
  Vitis vinifera blastx  GSVIVT01018883001|PACid:17828686 69.7 9e-21
  Ricinus communis blastx  30170.m013789|PACid:16821634 87.8 4e-18
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
Sequence: Contig02046_1_ORF2  Length: 56 aa
No hits reported.
Sequence: Contig02046_1_ORF3  Length: 56 aa
No hits reported.
Sequence: Contig02046_2_ORF2  Length: 53 aa
noIPR
unintegrated
unintegrated
seg[7-24]? NA seg segseg
Sequence: Contig02046_3_ORF1  Length: 56 aa
No hits reported.
Sequence: Contig02046_3_ORF2  Length: 52 aa
No hits reported.
Sequence: Contig02046_4_ORF2  Length: 62 aa
noIPR
unintegrated
unintegrated
seg[25-36]? NA seg segseg
Sequence: Contig02046_5_ORF1  Length: 50 aa
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[1-43]T 0.00063 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[1-34]T 3e-07 PF00069 PkinasePkinase