Sequence ID | ||
Sequence Length | 640 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | Mapped | |
Gbrowse Ath | - | |
Transcript scaffold composed of the full-length cDNA(s) | Scaffold02634 | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_002018 (Scaffold02634) |
>Contig02045 GGTAGTTCACCTAAATAAGATTGAAAAGGTTGTCGTTACGTTACAAAAGAGAAACGGACTCTCCGGCCCGCCTGTGAGAT GAGATAAGCCAAAAAAATATCCACATTATTTATTGCGACGATTTGCTTTTGCTTTCGCTTTCGCACCCTACTTTGATCGC GACGAGATAACGGACCTTGGTCGCTGCGAAGTTTCATAGAATTCATCGTTGACAACCACTTCACTACAGCAGATCGAATA CCAAGCTTCTCAATCTTTTTTTTTTTTAGCTTCACGGAGAACCATAATTTGTGCTTTTATGGCGCCAAATTGAGCGAGGC TGGATTTTGGACGAGCTCCGGCGATGAAATGGGCCAATTTGTCGATTGTTTCGCTATAGCAATGTGTTTCTTTTGTTGGG AATTGGATGAATTTTGAATTTGTTCCAGAGAAATTTTAATTGAGTTTGGGGATGAGTTCTTAGCGGATTGTGAAGTTGGT TTATTTGGATAAGGAAGATATTCACAAGATCAAAAGAAATGGCTACTCCTGTTGAGCCTCCAAATGGAGTTAGGATTCAG GGGAAGCATTACTATTCTATGTGGCAAACCTTGTTTGAGATTGACACGAAATATGTGCCCATCAAGCCTATTGGCCGAGG |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ef|XP_002306886.1| predicted protein [Populus trichocarpa] >gi|... 88 1e-15 >ref|XP_002306886.1| predicted protein [Populus trichocarpa] gb|EEE93882.1| predicted protein [Populus trichocarpa] | 87.8 | 1e-15 |
Manihot esculenta | blastn | - | - | - |
FGENESH CDS | blastn | - | - | - |
Arabidopsis thaliana | blastx | AT1G59580.2 | Symbols: ATMPK2, MPK2 | mitogen-activated protein kinase homolog 2 | chr1:21884521-21885743 FORWARD LENGTH=376 | 84.0 | 8e-17 |
Populus trichocarpa | blastx | POPTR_0005s25270.2|PACid:18208046 | 87.8 | 6e-18 |
Vitis vinifera | blastx | - | - | - |
Ricinus communis | blastx | 30170.m013789|PACid:16821634 | 85.5 | 2e-17 |
InterProScan |
No hits found |
Sequence: Contig02045_1_ORF2 Length: 86 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig02045_1_ORF3 Length: 49 aa | |
No hits reported. |
Sequence: Contig02045_3_ORF1 Length: 55 aa | |
No hits reported. |
Sequence: Contig02045_4_ORF2 Length: 61 aa | |
No hits reported. |
Sequence: Contig02045_5_ORF2 Length: 60 aa | |
No hits reported. |
Sequence: Contig02045_6_ORF2 Length: 70 aa | |||||||
noIPR unintegrated |
|
Sequence: Contig02045_6_ORF3 Length: 86 aa | |||||||
noIPR unintegrated |
|