Sequence ID | ||
Sequence Length | 620 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | - | |
Gbrowse Vvi | - | |
Gbrowse Ath | - | |
Transcript scaffold composed of the full-length cDNA(s) | Scaffold01949 | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_001499 (Scaffold01949) |
>Contig01469 GGTGACTTGTGTTCTCTGTTCTCTCTTTCTTTCCCTCAAAGAAAATAAAACTCAAAACCCACAAGCAGAGGAAACCAGGG CAAGAAGAAGAAGAAGAAGAATTCTCTAATTCTTTTCTTTTTTTCTGAGATTTCTTGTAATCATCGGCTTGTGATTCTTT CACCCATGGATTGGTTTCGCGGAGATTGTATTGGTTGTGGTAGCTTTTCCACTGTTAATTTGGCAATTCCCAGGAGTATC TCTGCTCCTTTAATGGCGGTGAAATCTTGTGATGTTTTTGAATCTTCTTTGCTTGAGAATGAGAAGGATGTCTTGACTCA ACTTGGGAATTGTGAGCATGTCATCCAGTGTTTCGGCGGTGATCAGAGTGTTGAAAACGGGAAGATGTTGTATAATTTGC TGTTAGAGTATGCTTCTGGCGGTAGTTTATCTCATTTGGTAAAGAAATCTGGTGGTTGCTTGCCGGAATCGGATGCCAGA CGCTACACGAGATCGATATTAAAGGGTCTTCATTATATTCACGCCAAAGGGTTTGCTCACTGCGATATAAAGCTTCAGAA TATTTTGTTGTTTGAGAATGGGGAAGCGAAGATTGCAGACTTCGGATTGGCGAAGAAACA |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002523600.1| ATP binding protein, putative [Ricinus communis] gb|EEF38795.1| ATP binding protein, putative [Ricinus communis] | 238 | 4e-61 |
Manihot esculenta | blastn | cassava4.1_020998m|PACid:17985420 | 898 | 0.0 |
FGENESH CDS | blastn | scaffold10453_FGENESH2 3 exon (s) 44212 - 45802 1188 bp, chain - | 898 | 0.0 |
Arabidopsis thaliana | blastx | AT4G36950.1 | Symbols: MAPKKK21 | mitogen-activated protein kinase kinase kinase 21 | chr4:17422834-17423844 REVERSE LENGTH=336 | 176 | 1e-44 |
Populus trichocarpa | blastx | POPTR_0005s18230.1|PACid:18208980 | 199 | 1e-51 |
Vitis vinifera | blastx | GSVIVT01022117001|PACid:17831030 | 170 | 5e-43 |
Ricinus communis | blastx | 30115.m001222|PACid:16818001 | 238 | 2e-63 |
InterProScan |
GO:0004672
Molecular Function protein kinase activity |
GO:0005524
Molecular Function ATP binding |
GO:0006468
Biological Process protein amino acid phosphorylation |
Sequence: Contig01469_1_ORF2 Length: 190 aa | ||||||||||||||||
InterPro IPR000719 Domain |
| |||||||||||||||
InterPro IPR002290 Domain |
| |||||||||||||||
InterPro IPR008271 Active_site |
| |||||||||||||||
InterPro IPR011009 Domain |
| |||||||||||||||
InterPro IPR017441 Conserved_site |
| |||||||||||||||
InterPro IPR017442 Domain |
| |||||||||||||||
noIPR unintegrated |
|
Sequence: Contig01469_4_ORF2 Length: 50 aa | |
No hits reported. |
Sequence: Contig01469_5_ORF1 Length: 92 aa | |
No hits reported. |
Sequence: Contig01469_5_ORF2 Length: 71 aa | ||||||||||
noIPR unintegrated |
|
Sequence: Contig01469_6_ORF2 Length: 58 aa | |
No hits reported. |