Sequence ID | CK652606 | |
Sequence Length | 452 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | - | |
Gbrowse Ath | - | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_015302 (CK652606) |
>CK652606 GAGCTGTCATCTCATCAACGGTGATGGAGATATAGGCACACTCAGGCAGGTTCATGTGGTGTCTGGACTTCCTGCTGAGT CAAGTACTGAGAGACTTGAGATTCTTGATGATGAACGTCATGTCTTGAGCTTTAGCGTGATTGGCGGCAACCACCGGCTA AATAATTACCGATCAGTGACCACGCTCCACGCTTCTCCGGGTGAAAACGGTACGGTTGTTATTGAATCATATGTGGTTGA TATACCGGCAGGGAATACAAAGGAAGATACATGTAGCTTCGCCGATACAATTGTACGGTGCAACTTGGAATCTCTGGCTC AGATTTCTGAGAACATGGCCAAGAACACCCAGATAAAGATATCATCTCCATCGTCATCATCATCTTGAATTGATTGTTTT GAAATGGGTTCTTTCATAAATTTTTTGTTTTCCATTCAGGTTTGGATTTGAT |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002520792.1| conserved hypothetical protein [Ricinus communis] gb|EEF41501.1| conserved hypothetical protein [Ricinus communis] | 207 | 4e-52 |
Manihot esculenta | blastn | cassava4.1_034305m|PACid:17964116 | 753 | 0.0 |
FGENESH CDS | blastn | scaffold05009_FGENESH12 1 exon (s) 83953 - 84615 663 bp, chain - | 753 | 0.0 |
Arabidopsis thaliana | blastx | AT2G38310.1 | Symbols: PYL4, RCAR10 | PYR1-like 4 | chr2:16050251-16050874 FORWARD LENGTH=207 | 180 | 4e-46 |
Populus trichocarpa | blastx | POPTR_0010s19120.1|PACid:18239920 | 207 | 2e-54 |
Vitis vinifera | blastx | GSVIVT01013161001|PACid:17824491 | 145 | 6e-36 |
Ricinus communis | blastx | 29729.m002290|PACid:16806939 | 207 | 1e-54 |
InterProScan |
GO:0006952
Biological Process defense response |
GO:0009607
Biological Process response to biotic stimulus |
Sequence: CK652606_2_ORF1 Length: 128 aa | |||||||||||||
InterPro IPR000916 Family |
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noIPR unintegrated |
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Sequence: CK652606_3_ORF2 Length: 58 aa | |||||||
noIPR unintegrated |
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Sequence: CK652606_4_ORF2 Length: 50 aa | |
No hits reported. |
Sequence: CK652606_6_ORF2 Length: 64 aa | |
No hits reported. |