Home > Keyword search > CK652363

Summary
Sequence ID CK652363
Sequence Length 483 nucleotides
Gbrowse Mes 
Gbrowse Rco  Mapped
Gbrowse Ptr  Mapped
Gbrowse Vvi  Mapped
Gbrowse Ath  Mapped
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_015274 (CK652363)
 
 
Sequence
>CK652363
CGGAGGTGTAGTGCCACTTGTTCGTCATAAATGGGTTGGAAGATTCTTTGCATTGAAGGTCATCCAGATGAACATACAAG
AAGATATTCGCAAACAAATTGTACAGGAGCTGAAAATAAACCAAGCTTCCCAATGTTCTCATGTTGTTGTTTGCCACCAT
TCATTCTATCACAATGGAGCTATTTCTCTTGTGTTAGAATACATGGACCGTGGGTCTCTAGCAGATGTGATTAGACAAGT
TAAAACAATTCTCGAACCTTATCTGGCTGTTGTGTGTAAGCAGGTTTTACAGGGTCTTGTGTATCTACACCATGAGCGAC
ATGTCATACATAGGGACATTAAGCCATCTAATCTATTGGTAAACCACAAGGGGGAAGTGAAGATCACTGATTTTGGTGTG
AGTGCAATGCTAGCTAGTTCTATGGGTCAAAGGGACACATTTGTTGGAACTTACAATTACATGTCGCCAGAGCGAATTAG
CGG

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ef|XP_002330495.1| predicted protein [Populus trichocarpa] >gi|... 308 2e-82 >ref|XP_002330495.1| predicted protein [Populus trichocarpa] gb|EEF09560.1| predicted protein [Populus trichocarpa] 308 2e-82
  Manihot esculenta blastn  cassava4.1_032246m|PACid:17964220 942 0.0
  FGENESH CDS blastn  scaffold09501_FGENESH37 8 exon (s) 347345 - 351319 1158 bp, chain - 846 0.0
  Arabidopsis thaliana blastx  AT5G56580.1 | Symbols: ATMKK6, ANQ1, MKK6 | MAP kinase kinase 6 | chr5:22904851-22906620 REVERSE LENGTH=356 298 2e-81
  Populus trichocarpa blastx  POPTR_0018s06810.2|PACid:18214995 308 2e-84
  Vitis vinifera blastx  GSVIVT01015283001|PACid:17826070 303 3e-83
  Ricinus communis blastx  29912.m005366|PACid:16813243 306 2e-84
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
Sequence: CK652363_1_ORF2  Length: 67 aa
No hits reported.
Sequence: CK652363_2_ORF1  Length: 160 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[1-160]T 2e-83 PD000001 Q9AYN9_TOBAC_Q9AYN9;Q9AYN9_TOBAC_Q9AYN9;
PS50011[1-160]T 29.969 PS50011 PROTEIN_KINASE_DOMPROTEIN_KINASE_DOM
InterPro
IPR001245
Domain
Tyrosine protein kinase
SM00219[6-159]T 0.0014 SM00219 no descriptionno description
InterPro
IPR002290
Domain
Serine/threonine protein kinase
SM00220[2-160]T 4.8e-11 SM00220 no descriptionno description
InterPro
IPR008271
Active_site
Serine/threonine protein kinase, active site
PS00108[108-120]T 8e-5 PS00108 PROTEIN_KINASE_STPROTEIN_KINASE_ST
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[2-159]T 3e-45 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[2-159]T 1e-38 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
G3DSA:1.10.510.10[55-159]T 3.2e-29 G3DSA:1.10.510.10 no descriptionno description
PTHR22986[1-160]T 3.2e-123 PTHR22986 MAPKK-RELATED SERINE/THREONINE PROTEIN KINASESMAPKK-RELATED SERINE/THREONINE PROTEIN KINASES
PTHR22986:SF39[1-160]T 3.2e-123 PTHR22986:SF39 MITOGEN ACTIVATED PROTEIN KINASE KINASE, MAPKK2MITOGEN ACTIVATED PROTEIN KINASE KINASE, MAPKK2
Sequence: CK652363_4_ORF2  Length: 55 aa
No hits reported.
Sequence: CK652363_5_ORF2  Length: 53 aa
No hits reported.