Home > Keyword search > CK652271

Summary
Sequence ID CK652271
Sequence Length 583 nucleotides
Gbrowse Mes 
Gbrowse Rco  Mapped
Gbrowse Ptr  Mapped
Gbrowse Vvi  Mapped
Gbrowse Ath  Mapped
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_015260 (CK652271)
 
 
Sequence
>CK652271
CAGATTTCATGACTGAATATGTAGTAACTCGATGGTATCGAGCCCCAGAGTTGCTGCTCAACTGTTCAGAATACACTGCA
GCTATTGATATTTGGTCAGTTGGCTGCATTTTCATGGAAGTTATTAGAAGGGAACCTCTTTTCCCTGGCAAGGACTATGT
TCAGCAATTGGGACTCATAACCGAGTTGTTAGGTTCACCAGACGATTCGGATCTTGGATTCCTTCGAAGTGATAATGCTC
GGAGATATGTCAAGCAGCTTCCACACTTCCCCAAGCAACCTTTTGCACAAAAGTTTCCAGATTTGTCAGCTGTAGCACTT
GATCTTGCTGAGAAAATGCTAGTGTTCGATCCGTGCAAACGCATAACTGTTGAGGAAGCATTGAACCATCCATATTTATC
AAGTCTTCATGAGATCAACGAGGAGCCCACTTGTCTGTCTCCTTTTATCTTCGATTTTGAGCAAATTTCGTTGAACGAAG
ACGACATAAAGGAGCTTATATTTGCAGAATCTTTGAAACTTCACCCAGATGTCATGCTTGAGTAATATATATATCAGCAG
CATTTATTTATTCTTTTGAAAAG

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002530237.1| big map kinase/bmk, putative [Ricinus communis] gb|EEF32143.1| big map kinase/bmk, putative [Ricinus communis] 338 3e-91
  Manihot esculenta blastn  cassava4.1_009999m|PACid:17980964 1011 0.0
  FGENESH CDS blastn  scaffold03750_FGENESH46 6 exon (s) 457105 - 459571 1116 bp, chain - 1011 0.0
  Arabidopsis thaliana blastx  AT1G07880.2 | Symbols: ATMPK13 | Protein kinase superfamily protein | chr1:2434193-2435712 REVERSE LENGTH=363 282 9e-77
  Populus trichocarpa blastx  POPTR_0002s16400.1|PACid:18245680 273 7e-74
  Vitis vinifera blastx  GSVIVT01025091001|PACid:17833154 311 1e-85
  Ricinus communis blastx  28752.m000329|PACid:16801654 338 1e-93
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
detail
Sequence: CK652271_1_ORF2  Length: 50 aa
No hits reported.
Sequence: CK652271_3_ORF1  Length: 180 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[1-98]T 5e-42 PD000001 Q6T6J8_MAIZE_Q6T6J8;[101-131]T 0.004 PD000001 Q6T6J8_MAIZE_Q6T6J8;Q6T6J8_MAIZE_Q6T6J8;
PS50011[1-132]T 15.976 PS50011 PROTEIN_KINASE_DOMPROTEIN_KINASE_DOM
InterPro
IPR002290
Domain
Serine/threonine protein kinase
SM00220[1-132]T 0.00026 SM00220 no descriptionno description
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[3-163]T 2.1e-34 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[3-132]T 7.3e-34 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
PD054205[136-171]T 2e-10 PD054205 Q9ZP91_MEDSA_Q9ZP91;Q9ZP91_MEDSA_Q9ZP91;
G3DSA:1.10.510.10[1-175]T 2.4e-35 G3DSA:1.10.510.10 no descriptionno description
PTHR11295[1-63]T 6.1e-49 PTHR11295 CDC2, MAP KINASE-RELATEDCDC2, MAP KINASE-RELATED
PTHR11295:SF69[1-63]T 6.1e-49 PTHR11295:SF69 MITOGEN-ACTIVATED PROTEIN KINASE 7 (ERK5)-RELATEDMITOGEN-ACTIVATED PROTEIN KINASE 7 (ERK5)-RELATED
Sequence: CK652271_4_ORF2  Length: 54 aa
No hits reported.
Sequence: CK652271_5_ORF2  Length: 81 aa
No hits reported.
Sequence: CK652271_5_ORF3  Length: 51 aa
No hits reported.
Sequence: CK652271_6_ORF2  Length: 54 aa
No hits reported.