Home > Keyword search > CK650357

Summary
Sequence ID CK650357
Sequence Length 477 nucleotides
Gbrowse Mes 
Gbrowse Rco  Mapped
Gbrowse Ptr  Mapped
Gbrowse Vvi  -
Gbrowse Ath  Mapped
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_014983 (CK650357)
 
 
Sequence
>CK650357
CGGATCCCTTGAAGGGACACATATCAGCCTGGAGGCCCACTTGTCAGATGTTGCCCGACAAATCTTGAGCGGGATGGCGT
ATCTCCACCGCCGTAAAATAGTGCACAGGGATATCAAACCTTCGAATCTGTTAATCGATTCAAGGAAGAATGTGAAAATT
GCAGATTTTGGGGTGAGCAGGATTTTGGCTCAGACTATGGATCCCTGCAATTCATCGGTGGGTACTATTGCCTATATGAG
TCCTGAAAGGATCAACACGGACTTGAATCACGGCCAATACGACGGTTATGCCGGTGATATTTGGAGTTTGGGCGTGAGCA
TATTGGAGTTCTATTTGGGGAGGTTTCCGTTTGCCGTCGGGCGGCAGGGCGATTGGGCAAGCTTGATGTGTGCCATTTGT
ATGTCTCAGCCACCGGAAGCTCCGCCGACTGCTTCCAGGGAGTTTCGTAATTTTATTGCTTGTTGTCTGCAAAGGGA

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002523019.1| mitogen activated protein kinase kinase, putative [Ricinus communis] gb|EEF39361.1| mitogen activated protein kinase kinase, putative [Ricinus communis] 300 4e-80
  Manihot esculenta blastn  cassava4.1_010592m|PACid:17985656 946 0.0
  FGENESH CDS blastn  scaffold01027_FGENESH22 1 exon (s) 479994 - 481064 1071 bp, chain - 946 0.0
  Arabidopsis thaliana blastx  AT3G21220.1 | Symbols: ATMKK5, ATMAP2K_ALPHA, MAP2K_A, MKK5, ATMEK5, MEK5 | MAP kinase kinase 5 | chr3:7445917-7446963 FORWARD LENGTH=348 288 1e-78
  Populus trichocarpa blastx  POPTR_0008s01030.5|PACid:18248969 300 3e-82
  Vitis vinifera blastx  GSVIVT01016115001|PACid:17826627 288 6e-79
  Ricinus communis blastx  29748.m000383|PACid:16807778 300 2e-82
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
detail
Sequence: CK650357_1_ORF2  Length: 50 aa
No hits reported.
Sequence: CK650357_2_ORF1  Length: 158 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[1-158]T 2e-81 PD000001 Q7XAC9_SOLTU_Q7XAC9;Q7XAC9_SOLTU_Q7XAC9;
PS50011[1-158]T 29.941 PS50011 PROTEIN_KINASE_DOMPROTEIN_KINASE_DOM
InterPro
IPR001245
Domain
Tyrosine protein kinase
SM00219[1-158]T 0.0013 SM00219 no descriptionno description
InterPro
IPR002290
Domain
Serine/threonine protein kinase
SM00220[1-158]T 2e-10 SM00220 no descriptionno description
InterPro
IPR008271
Active_site
Serine/threonine protein kinase, active site
PS00108[33-45]T 8e-5 PS00108 PROTEIN_KINASE_STPROTEIN_KINASE_ST
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[11-158]T 2.2e-42 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[11-158]T 4e-40 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
G3DSA:1.10.510.10[1-158]T 3.7e-37 G3DSA:1.10.510.10 no descriptionno description
PTHR22986[5-158]T 1.1e-107 PTHR22986 MAPKK-RELATED SERINE/THREONINE PROTEIN KINASESMAPKK-RELATED SERINE/THREONINE PROTEIN KINASES
PTHR22986:SF31[5-158]T 1.1e-107 PTHR22986:SF31 MITOGEN ACTIVATED PROTEIN KINASE KINASEMITOGEN ACTIVATED PROTEIN KINASE KINASE
Sequence: CK650357_4_ORF2  Length: 63 aa
No hits reported.
Sequence: CK650357_5_ORF1  Length: 87 aa
No hits reported.
Sequence: CK650357_6_ORF2  Length: 66 aa
No hits reported.