Summary
| Sequence ID | CK645704 | |
| Sequence Length | 539 nucleotides | |
| Gbrowse Mes | ||
| Gbrowse Rco | - | |
| Gbrowse Ptr | - | |
| Gbrowse Vvi | - | |
| Gbrowse Ath | - | |
| Corresponding scaffold | - | |
| Related probe ID of RIKEN ver.1 microarray | R_Mes01_014616 (CK645704) |
| >CK645704 GCATTACCAAAAACTCACTCTGTATCTTTCTATTTTCAAAAACTAAAAATGACACTATGGGGCAAATTAGAGGCACAGTT TGGGATCGATGCTCCTGCAGATCAGTTTCATGATGTCTTCAGTTGCCGACCACACCATATATCCAATATGTCCCCTCACA AAGTTCAGGGTTATGATCTTCTTGAAGGTGAATGGGGTAAGGAAGGTGCTGTTGTCTGCTGGAAATATTTCCATGATGGG TCTGTCAAAGTGGCAAAAGAGATAATTGAAACCATAGATGATGTGAATTTATTAACCGTCTTCAAAGTGATCGGAGGAGA TTTGTTGAAGGAATATAAGAGTTTTAAGTTGACCGTTCAAGCTGCGCCTAAGGGAAAGGGCAGCATGGTGCGCTGGACTT TAGAATACGAGAAGATCCATGAGAATATACGAGATCCTTACTCCTTGCTAGAGTTGATTGTCGACTTTAGTAAGGATGTT TCTGCTCATCTCGTGAAATGCCAAAAGAAATGATTATGGAACATGTTATGCTCTAATAT |
| vs DB | Program | Description | Score | |
|---|---|---|---|---|
| NCBI nr | blastx | ef|XP_002315876.1| predicted protein [Populus trichocarpa] >gi|... 193 1e-47 >ref|XP_002315876.1| predicted protein [Populus trichocarpa] gb|EEF02047.1| predicted protein [Populus trichocarpa] | 193 | 1e-47 |
| Manihot esculenta | blastn | cassava4.1_018238m|PACid:17972619 | 803 | 0.0 |
| FGENESH CDS | blastn | scaffold00318_FGENESH62 2 exon (s) 505734 - 506278 465 bp, chain + | 803 | 0.0 |
| Arabidopsis thaliana | blastx | AT1G70830.5 | Symbols: MLP28 | MLP-like protein 28 | chr1:26710203-26711395 REVERSE LENGTH=173 | 161 | 2e-40 |
| Populus trichocarpa | blastx | POPTR_0010s12110.1|PACid:18241894 | 193 | 8e-50 |
| Vitis vinifera | blastx | GSVIVT01011719001|PACid:17823515 | 158 | 1e-39 |
| Ricinus communis | blastx | 29947.m000052|PACid:16814350 | 192 | 1e-49 |
| InterProScan |
| GO:0006952
Biological Process defense response |
| GO:0009607
Biological Process response to biotic stimulus |
| Sequence: CK645704_1_ORF1 Length: 170 aa | ||||||||||
| InterPro IPR000916 Family |
| |||||||||
| noIPR unintegrated |
| |||||||||
![[32-163]T 5e-11 PD000531 Q8L9L8_ARATH_Q8L9L8;](http://pmix.psc.riken.jp/img/interpro/D.gif){kind=small}
![[18-167]T 1.9e-58 PF00407 Bet_v_I](http://pmix.psc.riken.jp/img/interpro/H.gif){kind=small}
![[17-169]T 1.3e-37 G3DSA:3.30.530.20 no description](http://pmix.psc.riken.jp/img/interpro/X2.gif){kind=small}
![[19-166]T 4.2e-38 SSF55961 Bet v1-like](http://pmix.psc.riken.jp/img/interpro/B.gif){kind=small}
| Sequence: CK645704_2_ORF2 Length: 64 aa | |
| No hits reported. | |
| Sequence: CK645704_4_ORF2 Length: 73 aa | |
| No hits reported. | |
| Sequence: CK645704_6_ORF2 Length: 61 aa | |
| No hits reported. | |
