Home > Keyword search > CK645475

Summary
Sequence ID CK645475
Sequence Length 540 nucleotides
Gbrowse Mes 
Gbrowse Rco  Mapped
Gbrowse Ptr  Mapped
Gbrowse Vvi  Mapped
Gbrowse Ath  -
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_014552 (CK645475)
 
 
Sequence
>CK645475
AAATTACTGACTTTGGCGTGAGTGCAATAATGGCAAGCACCTCTGGACAGGCAAATACTTTTATTGGTACATATAACTAT
ATGTCCCCTGAAAGAATTATTGGAGGAAGATATGGATACAAAAGTGACATTTGGAGCCTGGGTTTAGTATTGCTCGAGTG
TGCAACTGGTCAGTTCCCGTATTCCCCTCCACAGAAGGATGAAGGTTGGGTTAATGTTTATGAGCTTATGGAAGCTGTTG
TTGAGCAACCACAACCCTGTGCACCTTCTGATCAATTTTCTCCAGAGTTCTGCTCATTTATATCTTCATGTGTGCAGAAA
GACCCAAAAGACAGACTGTCAGCAAATGAACTTATGACTCATCCATTTGTGAACATGTATGATGACCTGCACATAGATCT
CTCCTCTTACTTCACAAATTCAGGCTCTCCACTTGCAAACTTAAACGTATGATAGAATATGAAACAGTTTAAGAGATGTT
CGCTGCCTGAAATTTTTAAGACCTGCCACAGCAACTGTGGAAAAACACTTGCTACCATTA

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ef|XP_002324775.1| predicted protein [Populus trichocarpa] >gi|... 261 4e-68 >ref|XP_002324775.1| predicted protein [Populus trichocarpa] gb|EEF03340.1| predicted protein [Populus trichocarpa] 261 4e-68
  Manihot esculenta blastn  cassava4.1_010713m|PACid:17990636 880 0.0
  FGENESH CDS blastn  scaffold10493_FGENESH87 6 exon (s) 890642 - 893762 954 bp, chain + 607 1e-173
  Arabidopsis thaliana blastx  AT4G29810.2 | Symbols: ATMKK2, MKK2, MK1 | MAP kinase kinase 2 | chr4:14593299-14595241 REVERSE LENGTH=372 220 5e-58
  Populus trichocarpa blastx  POPTR_0018s05420.2|PACid:18214792 261 3e-70
  Vitis vinifera blastx  GSVIVT01015155001|PACid:17825956 249 7e-67
  Ricinus communis blastx  29912.m005307|PACid:16813186 219 6e-58
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
Sequence: CK645475_1_ORF2  Length: 69 aa
No hits reported.
Sequence: CK645475_3_ORF1  Length: 149 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[1-122]T 5e-59 PD000001 Q9M6Q9_TOBAC_Q9M6Q9;Q9M6Q9_TOBAC_Q9M6Q9;
PS50011[1-123]T 23.213 PS50011 PROTEIN_KINASE_DOMPROTEIN_KINASE_DOM
InterPro
IPR002290
Domain
Serine/threonine protein kinase
SM00220[1-123]T 9.4e-06 SM00220 no descriptionno description
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[1-132]T 6.6e-33 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[1-123]T 6.1e-33 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
G3DSA:1.10.510.10[1-127]T 8.9e-29 G3DSA:1.10.510.10 no descriptionno description
PTHR22986[1-137]T 7.9e-89 PTHR22986 MAPKK-RELATED SERINE/THREONINE PROTEIN KINASESMAPKK-RELATED SERINE/THREONINE PROTEIN KINASES
PTHR22986:SF39[1-137]T 7.9e-89 PTHR22986:SF39 MITOGEN ACTIVATED PROTEIN KINASE KINASE, MAPKK2MITOGEN ACTIVATED PROTEIN KINASE KINASE, MAPKK2