Home > Keyword search > CAS01_033_H01.r

Summary
Sequence ID CAS01_033_H01.r (DB949201)
Sequence Length 282 nucleotides
Gbrowse Mes 
Gbrowse Rco  -
Gbrowse Ptr  -
Gbrowse Vvi  -
Gbrowse Ath  -
Transcript scaffold composed of the full-length cDNA(s)  Scaffold11108
Related probe ID of RIKEN ver.1 microarray  R_Mes01_008737 (Scaffold11108)
 
 
Sequence
>CAS01_033_H01.r
GAATCTCTCTTCTTCTTCTTCTTCTTCCGCTTTCTTTGTTTTTTCCCCCTCTTTCTTGCTTGGAGGTTAGCCTATTTGAC
CTAAAGTTCTATATTGGTCGGCTGCAGCCTGCAGGGGTTGGCTGCTTTGAGATATTCTATTTTACTATATACCATGGCAT
TGGCACATCTCTCGGCTCTATCCACAAATAAAATACTTTTAATCTGTACGTGAACTTGGATGTTTGGGAAAAACGAGTTC
CTCTCAAGTAAGATTAAACATAGCCTAGTCGCACATCCAACC

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx - - -
  Manihot esculenta blastn - - -
  FGENESH CDS blastn - - -
  Arabidopsis thaliana blastx - - -
  Populus trichocarpa blastx - - -
  Vitis vinifera blastx - - -
  Ricinus communis blastx - - -
 
 
Gene Ontology 
InterProScan
No hits found
 
 
InterProScan result 
Sequence: CAS01_033_H01.r_3_ORF1  Length: 62 aa
noIPR
unintegrated
unintegrated
seg[2-18]? NA seg segseg
Sequence: CAS01_033_H01.r_6_ORF1  Length: 66 aa
No hits reported.