Sequence ID | CAS01_033_H01.f (DB931774) | |
Sequence Length | 620 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | Mapped | |
Gbrowse Ath | - | |
Transcript scaffold composed of the full-length cDNA(s) | Scaffold11108 | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_008737 (Scaffold11108) |
>CAS01_033_H01.f GAAGCGTTTCCGCTTTTCTCATCCGAAGACTTTCAACGACTCTCCTCTCTCTTCCACTTCCTGATCATGAAGAAGGGGTC CTTAAACCCTAACATCAAGCTCAAGCTCTCTCTCCCTCCTCCCGATGAAGTTTCCTTCGCCAAGTTCCTAACCCAAAGCG GTACATTTATGGATGGTGATTTGCTTGTCAATCGAGATGGAGTTCGAATTGTCTCGCAAAGCGAACCCGAAGCTCCACCT CCTATTAAACCATCGGACAACCAGTTGAATTTAGCAGACATAGACACCATTAAGGTCATTGGGAAGGGAAGCAGTGGAAT TGTGCAACTGGTGCAACATAAATGGACAGGCCAGTTTTTTGCATTAAAGGTTATACAAATGAATATTGAGGAGAATGCAA GGAAAGCAATTGCCAAGGAACTAAAAATTAATCAATCAGCTCAATGTCCATATGTTGTTATGTGCTACCAGTCTTTCTAT GACAATGGTGCCATTTCAATCATCCTAGAGTATATGGATGGTGGATCTTTGGCAGATCTTCTGAAAAAGGTTAAAACAAT TCCAGAACCATATCTTGCTGCCATCTGTAAGCAGGTGCTCAAGGGTTTGTTGTATCTTCA |
vs DB | Program | Description | Score | |
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NCBI nr | blastx | ref|XP_002514093.1| mitogen activated protein kinase kinase, mapkk2, putative [Ricinus communis] gb|EEF48047.1| mitogen activated protein kinase kinase, mapkk2, putative [Ricinus communis] | 348 | 2e-94 |
Manihot esculenta | blastn | cassava4.1_010578m|PACid:17990635 | 632 | 0.0 |
FGENESH CDS | blastn | scaffold07318_FGENESH22 8 exon (s) 179534 - 181654 990 bp, chain + | 765 | 0.0 |
Arabidopsis thaliana | blastx | AT4G29810.1 | Symbols: ATMKK2, MKK2, MK1 | MAP kinase kinase 2 | chr4:14593299-14595241 REVERSE LENGTH=363 | 265 | 2e-71 |
Populus trichocarpa | blastx | POPTR_0018s05420.2|PACid:18214792 | 333 | 5e-92 |
Vitis vinifera | blastx | GSVIVT01015155001|PACid:17825956 | 295 | 1e-80 |
Ricinus communis | blastx | 29912.m005307|PACid:16813186 | 348 | 8e-97 |
InterProScan |
GO:0004672
Molecular Function protein kinase activity |
GO:0005524
Molecular Function ATP binding |
GO:0006468
Biological Process protein amino acid phosphorylation |
Sequence: CAS01_033_H01.f_1_ORF1 Length: 206 aa | |||||||||||||
InterPro IPR000719 Domain |
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InterPro IPR002290 Domain |
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InterPro IPR011009 Domain |
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InterPro IPR017441 Conserved_site |
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InterPro IPR017442 Domain |
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noIPR unintegrated |
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Sequence: CAS01_033_H01.f_6_ORF1 Length: 132 aa | |||||||
noIPR unintegrated |
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