Sequence ID | CAS01_028_K03.f (DB930014) | |
Sequence Length | 490 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | Mapped | |
Gbrowse Ath | Mapped | |
Transcript scaffold composed of the full-length cDNA(s) | Scaffold10819 | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_008451 (Scaffold10819) |
>CAS01_028_K03.f GAATCGAGAGACGCCAAGAAAGCCAGTTGCCTTTGGCTTCACGGTTTTCACACTCTCTTCTCGAACAAACGCCATTGCTC TGTTCTACTACCAAGGCGACAAAAACCTCCCTTTGCATTAAGGAAGGGAGGAAGAGGAGAGGGTACTTGCAGATTGATAG TCATGGCCACAAATAATAAAGACTCGAGCTCTGCTTCAACTGCAGATGCTGCTCATGGTACTAAAGTTAAAGGAGTGCCA ACACATGGGGGTCGCTATGTTCAATACAATGTTTATGGTAACTTGTTTGAGGTATCGAGCAAGTACGTGCCTCCCATTCG CCCCATCGGCCGTGGCGCTTATGGCATTGTTTGTGCTGCTGTGAATTCAGAGACACGTGAGGAAGTTGCCATTAAGAAGA TTGGTAATGCTTTTGACAACAGAATAGATGCCAAAAGAACGCTGAGAGAGATTAAGCTTCTTCGCCACATGGACCATGAA AATGTTATTG |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002509851.1| big map kinase/bmk, putative [Ricinus communis] gb|EEF51238.1| big map kinase/bmk, putative [Ricinus communis] | 195 | 2e-48 |
Manihot esculenta | blastn | cassava4.1_009399m|PACid:17971019 | 650 | 0.0 |
FGENESH CDS | blastn | scaffold05280_FGENESH70 6 exon (s) 565863 - 569281 1170 bp, chain - | 650 | 0.0 |
Arabidopsis thaliana | blastx | AT4G01370.1 | Symbols: ATMPK4, MPK4 | MAP kinase 4 | chr4:567219-568889 FORWARD LENGTH=376 | 163 | 6e-41 |
Populus trichocarpa | blastx | POPTR_0003s13170.2|PACid:18218343 | 184 | 2e-47 |
Vitis vinifera | blastx | GSVIVT01019406001|PACid:17829033 | 177 | 3e-45 |
Ricinus communis | blastx | 30190.m011265|PACid:16823622 | 195 | 1e-50 |
InterProScan |
GO:0004672
Molecular Function protein kinase activity |
GO:0005524
Molecular Function ATP binding |
GO:0006468
Biological Process protein amino acid phosphorylation |
Sequence: CAS01_028_K03.f_1_ORF1 Length: 163 aa | ||||||||||||||||
InterPro IPR000719 Domain |
| |||||||||||||||
InterPro IPR011009 Domain |
| |||||||||||||||
InterPro IPR017441 Conserved_site |
| |||||||||||||||
InterPro IPR017442 Domain |
| |||||||||||||||
noIPR unintegrated |
|
Sequence: CAS01_028_K03.f_2_ORF2 Length: 67 aa | |||||||
noIPR unintegrated |
|
Sequence: CAS01_028_K03.f_3_ORF1 Length: 57 aa | |
No hits reported. |
Sequence: CAS01_028_K03.f_4_ORF2 Length: 56 aa | |
No hits reported. |
Sequence: CAS01_028_K03.f_5_ORF2 Length: 54 aa | |
No hits reported. |
Sequence: CAS01_028_K03.f_5_ORF3 Length: 53 aa | |
No hits reported. |
Sequence: CAS01_028_K03.f_6_ORF1 Length: 49 aa | |||||||
noIPR unintegrated |
|
Sequence: CAS01_028_K03.f_6_ORF2 Length: 54 aa | |||||||
noIPR unintegrated |
|