Sequence ID | CAS01_025_O06.r (DB946770) | |
Sequence Length | 467 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | - | |
Gbrowse Ptr | - | |
Gbrowse Vvi | - | |
Gbrowse Ath | - | |
Transcript scaffold composed of the full-length cDNA(s) | Scaffold10628 | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_008261 (Scaffold10628) |
>CAS01_025_O06.r CATAAAAATTGCAGATTTTGGATTGGCAAAAGTAAAAGAATTAAAATATTTATTGAGTTCTTAATACTATGGGATCACAG GTTGGATGGCTTCTCATGTTGCTAAATCGGGAAATTATGGACCTAAAGCTGATATTTGGAGCCTTGGTTGCACAGCTCTG GAGATGTTAACAAGGAAAACTCATTACGTGATGGAAGGTGGGAAATTGCTAGACGTCCCAGATGTTCCATCACAGCATTC ACAAGATTTTATCAAGGAGTGCTTGCAAGATAATAAAGTTGACCGTCCATCTGCTGCTGAGCTTTTGCAACATCCTTTTG TGAAAGGTTTTGGCTTATAATATTTCTTCAGCTTGAACTATGTGATAGATGTGTGTTTATGAGCATTCAATATTAAGAAC TCCATAAATATTTATGAAATTTTATAATTTTGTTTAGTAATTTTTGGATTAGTGAAGTATTTGGGTT |
vs DB | Program | Description | Score | |
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NCBI nr | blastx | ref|XP_002527852.1| conserved hypothetical protein [Ricinus communis] gb|EEF34555.1| conserved hypothetical protein [Ricinus communis] | 112 | 3e-23 |
Manihot esculenta | blastn | cassava4.1_023677m|PACid:17986575 | 420 | 1e-117 |
FGENESH CDS | blastn | scaffold09809_FGENESH19 4 exon (s) 474932 - 477234 882 bp, chain + | 420 | 1e-117 |
Arabidopsis thaliana | blastx | AT4G12020.2 | Symbols: WRKY19, ATWRKY19, MAPKKK11, MEKK4 | protein kinase family protein | chr4:7201656-7209469 FORWARD LENGTH=1895 | 87.0 | 5e-18 |
Populus trichocarpa | blastx | POPTR_0002s08950.1|PACid:18245706 | 90.5 | 5e-19 |
Vitis vinifera | blastx | GSVIVT01023037001|PACid:17831649 | 96.7 | 4e-21 |
Ricinus communis | blastx | 29609.m000604|PACid:16803633 | 112 | 1e-25 |
InterProScan |
GO:0004672
Molecular Function protein kinase activity |
GO:0005524
Molecular Function ATP binding |
GO:0006468
Biological Process protein amino acid phosphorylation |
Sequence: CAS01_025_O06.r_2_ORF2 Length: 91 aa | |||||||||||||
InterPro IPR000719 Domain |
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InterPro IPR011009 Domain |
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InterPro IPR017442 Domain |
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noIPR unintegrated |
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Sequence: CAS01_025_O06.r_4_ORF2 Length: 57 aa | |||||||
noIPR unintegrated |
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