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Summary
Sequence ID CAS01_025_O06.r (DB946770)
Sequence Length 467 nucleotides
Gbrowse Mes 
Gbrowse Rco  -
Gbrowse Ptr  -
Gbrowse Vvi  -
Gbrowse Ath  -
Transcript scaffold composed of the full-length cDNA(s)  Scaffold10628
Related probe ID of RIKEN ver.1 microarray  R_Mes01_008261 (Scaffold10628)
 
 
Sequence
>CAS01_025_O06.r
CATAAAAATTGCAGATTTTGGATTGGCAAAAGTAAAAGAATTAAAATATTTATTGAGTTCTTAATACTATGGGATCACAG
GTTGGATGGCTTCTCATGTTGCTAAATCGGGAAATTATGGACCTAAAGCTGATATTTGGAGCCTTGGTTGCACAGCTCTG
GAGATGTTAACAAGGAAAACTCATTACGTGATGGAAGGTGGGAAATTGCTAGACGTCCCAGATGTTCCATCACAGCATTC
ACAAGATTTTATCAAGGAGTGCTTGCAAGATAATAAAGTTGACCGTCCATCTGCTGCTGAGCTTTTGCAACATCCTTTTG
TGAAAGGTTTTGGCTTATAATATTTCTTCAGCTTGAACTATGTGATAGATGTGTGTTTATGAGCATTCAATATTAAGAAC
TCCATAAATATTTATGAAATTTTATAATTTTGTTTAGTAATTTTTGGATTAGTGAAGTATTTGGGTT

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002527852.1| conserved hypothetical protein [Ricinus communis] gb|EEF34555.1| conserved hypothetical protein [Ricinus communis] 112 3e-23
  Manihot esculenta blastn  cassava4.1_023677m|PACid:17986575 420 1e-117
  FGENESH CDS blastn  scaffold09809_FGENESH19 4 exon (s) 474932 - 477234 882 bp, chain + 420 1e-117
  Arabidopsis thaliana blastx  AT4G12020.2 | Symbols: WRKY19, ATWRKY19, MAPKKK11, MEKK4 | protein kinase family protein | chr4:7201656-7209469 FORWARD LENGTH=1895 87.0 5e-18
  Populus trichocarpa blastx  POPTR_0002s08950.1|PACid:18245706 90.5 5e-19
  Vitis vinifera blastx  GSVIVT01023037001|PACid:17831649 96.7 4e-21
  Ricinus communis blastx  29609.m000604|PACid:16803633 112 1e-25
 
 
Gene Ontology 
InterProScan
GO:0004672
Molecular Function
protein kinase activity
GO:0005524
Molecular Function
ATP binding
GO:0006468
Biological Process
protein amino acid phosphorylation
 
 
InterProScan result 
Sequence: CAS01_025_O06.r_2_ORF2  Length: 91 aa
InterPro
IPR000719
Domain
Protein kinase, core
PD000001[3-85]T 1e-15 PD000001 Q84QA1_EEEEE_Q84QA1;Q84QA1_EEEEE_Q84QA1;
PS50011[1-86]T 13.051 PS50011 PROTEIN_KINASE_DOMPROTEIN_KINASE_DOM
InterPro
IPR011009
Domain
Protein kinase-like
SSF56112[1-88]T 1.4e-17 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR017442
Domain
Serine/threonine protein kinase-related
PF00069[18-39]T 1.3e-05 PF00069 Pkinase[60-86]T 5.4e-08 PF00069 PkinasePkinase
noIPR
unintegrated
unintegrated
G3DSA:1.10.510.10[1-89]T 4.9e-13 G3DSA:1.10.510.10 no descriptionno description
PTHR22986[7-87]T 3e-19 PTHR22986 MAPKK-RELATED SERINE/THREONINE PROTEIN KINASESMAPKK-RELATED SERINE/THREONINE PROTEIN KINASES
PTHR22986:SF63[7-87]T 3e-19 PTHR22986:SF63 MITOGEN ACTIVATED PROTEIN KINASE-RELATEDMITOGEN ACTIVATED PROTEIN KINASE-RELATED
Sequence: CAS01_025_O06.r_4_ORF2  Length: 57 aa
noIPR
unintegrated
unintegrated
seg[1-14]? NA seg segseg