Summary
| Sequence ID | CAS01_023_D19.r (DB945967) | |
| Sequence Length | 484 nucleotides | |
| Gbrowse Mes | ||
| Gbrowse Rco | Mapped | |
| Gbrowse Ptr | Mapped | |
| Gbrowse Vvi | Mapped | |
| Gbrowse Ath | - | |
| Transcript scaffold composed of the full-length cDNA(s) | Scaffold10446 | |
| Related probe ID of RIKEN ver.1 microarray | R_Mes01_008081 (Scaffold10446) |
| >CAS01_023_D19.r CAACGAGGAGCCTGTTTGCCCAAGGCCTTTCAACTTTGATTTTGAGCAGCCAACATTTACCGAGGAAAACATCAAGGAGC TCATCTGGAGGGAATCAGCAAAATTCAATCCGGATCCTTGAGAATTATCTGATAGTCTTTTGTACACGGGAAAATACTCA CATTACTCCCATCTTCATCATAATTATATAGAACCTGTCAAGAGTTCTAGGGAAAGAAGAAGGTATGTTGGGATTCACTC ACGCCACGGACTGTTGATTCCTTTTATCTCGAATCATTTATGATATCGAAGTGTGTGAAATGGAGGCTAGGTTTTCTTTA AGGTAACTGAGAAGAATCTCTATGAAAGTTAAATTTGTAATTTGTGTATATGGGCAAACCAATTGATTTGGGTGGATGGA GTGGCTGTTGTACTGGCAATCTCTTCCGTTCTGGAATGGGGATTTTGCATGGATCTGAGACCTAATTTCCCTTTCTTTTC CTTC |
| vs DB | Program | Description | Score | |
|---|---|---|---|---|
| NCBI nr | blastx | ref|XP_002511904.1| big map kinase/bmk, putative [Ricinus communis] gb|EEF50573.1| big map kinase/bmk, putative [Ricinus communis] | 87.0 | 9e-16 |
| Manihot esculenta | blastn | - | - | - |
| FGENESH CDS | blastn | - | - | - |
| Arabidopsis thaliana | blastx | AT4G01370.1 | Symbols: ATMPK4, MPK4 | MAP kinase 4 | chr4:567219-568889 FORWARD LENGTH=376 | 73.2 | 8e-14 |
| Populus trichocarpa | blastx | POPTR_0014s08450.1|PACid:18222776 | 79.3 | 1e-15 |
| Vitis vinifera | blastx | GSVIVT01026984001|PACid:17834523 | 83.6 | 4e-17 |
| Ricinus communis | blastx | 30174.m008647|PACid:16822293 | 87.0 | 4e-18 |
| InterProScan |
| No hits found |
| Sequence: CAS01_023_D19.r_2_ORF2 Length: 53 aa | |
| No hits reported. | |
| Sequence: CAS01_023_D19.r_3_ORF1 Length: 62 aa | |||||||
| noIPR unintegrated |
| ||||||
![[24-37]? NA seg seg](http://pmix.psc.riken.jp/img/interpro/G.gif){kind=small}
| Sequence: CAS01_023_D19.r_4_ORF2 Length: 54 aa | |
| No hits reported. | |
| Sequence: CAS01_023_D19.r_5_ORF1 Length: 68 aa | |
| No hits reported. | |
