Summary
| Sequence ID | CAS01_016_A21.r (DB943699) | |
| Sequence Length | 533 nucleotides | |
| Gbrowse Mes | ||
| Gbrowse Rco | - | |
| Gbrowse Ptr | - | |
| Gbrowse Vvi | - | |
| Gbrowse Ath | - | |
| Transcript scaffold composed of the full-length cDNA(s) | Scaffold01035 | |
| Related probe ID of RIKEN ver.1 microarray | R_Mes01_000793 (Scaffold01035) |
| >CAS01_016_A21.r GGACAAAGTGGTTACAACTTAACATGTTACTCATTGTTTTCAGCACTCCGATCAATAACATATGCTCATGATCTTGGCTT TGAAACATCGTTTTTCAAAAGCCAAACACCTGGCACATCTCCAAGAACAAGACCCATTTGAGACTGTAAATACCATCACC AGATACTTTTCATACTCTCTTCAATACCAAAGTTCTCCTCATGGCTTGAATTGAAGAATGAATGGAGTTGGTGGATTCTT TTCCCTGCAGAAACTGAGGGGAGAAACTTTGAGCACATGGGATAGATGCTGAATTGGATTAATCTCATGGATGATATTGT TGTAAAATGGCCTGTGGGTCAATTATGTGTGTAACATTCATAGTAAATTCCATAAAAAAGATCATTGCTTATACCAACAC TTGTAGCTACATAATGAAAAATATGTGGTTGAGGCTCCTTATAAACAACAGCAAAGGCAAGGCTGTGTCTGTGTCTGTGT GTGTAATGCTTCCCAACTATGTATGATGAGAATAAAAAGATTGATCGGAGTCC |
| vs DB | Program | Description | Score | |
|---|---|---|---|---|
| NCBI nr | blastx | ef|XP_002309908.1| predicted protein [Populus trichocarpa] >gi|... 55 5e-06 >ref|XP_002309908.1| predicted protein [Populus trichocarpa] gb|EEE90358.1| predicted protein [Populus trichocarpa] | 55.1 | 5e-06 |
| Manihot esculenta | blastn | - | - | - |
| FGENESH CDS | blastn | - | - | - |
| Arabidopsis thaliana | blastx | - | - | - |
| Populus trichocarpa | blastx | POPTR_0007s04070.1|PACid:18243224 | 55.1 | 3e-08 |
| Vitis vinifera | blastx | - | - | - |
| Ricinus communis | blastx | - | - | - |
| InterProScan |
| No hits found |
| Sequence: CAS01_016_A21.r_2_ORF2 Length: 51 aa | |
| No hits reported. | |
| Sequence: CAS01_016_A21.r_3_ORF2 Length: 63 aa | |
| No hits reported. | |
| Sequence: CAS01_016_A21.r_6_ORF1 Length: 64 aa | |
| No hits reported. | |
| Sequence: CAS01_016_A21.r_6_ORF2 Length: 60 aa | |
| No hits reported. | |
