Summary
| Sequence ID | CAS01_014_P07.r (DB943329) | |
| Sequence Length | 515 nucleotides | |
| Gbrowse Mes | ||
| Gbrowse Rco | - | |
| Gbrowse Ptr | - | |
| Gbrowse Vvi | - | |
| Gbrowse Ath | - | |
| Transcript scaffold composed of the full-length cDNA(s) | Scaffold09962 | |
| Related probe ID of RIKEN ver.1 microarray | R_Mes01_007602 (Scaffold09962) |
| >CAS01_014_P07.r AGTGCGAGCATTAGTGCTTCCAAGTGTATAGTAGCGAAACTAGGAACAGATACAGAGGATACAGTTGGTGAGGTAAGTGA TGAGTCAGTCAACGACTTGTCTCAGAAGGTTGCAACCCTCCATGCCTGATGCCTGAGAATTATCATAATCTCATCTGGAG ATTCAGATGGCTTAACCTCGTGATCTGCCCATTTTCCTCCATTTTGTGAACAGAGGATGTTTCTCAGTGACCTACAAGGA GGATCACGTAGAAGGTAACATGACTTCGTTGGCACCTGTGTTGCTAGATTACAGTGAAGAGATGCTTTCTTGTTAATGGC TCCATCTGTAATCTTTTGTATCTGGGCACAGTATCTGTATTTTGGACAGACAGCATAGTAACTTTTTTCAGTGTGATGCC AGGAAAGAACAGTTTTGGTCTGAAGAGTGGTATTTTCTTAATTTAATGATAGTTTATAGGATATATGGATTCGTGCATGT TGGATTAATATTGGCTTAATATATATTTACATCCC |
| vs DB | Program | Description | Score | |
|---|---|---|---|---|
| NCBI nr | blastx | ef|XP_002322093.1| predicted protein [Populus trichocarpa] >gi|... 56 2e-06 >ref|XP_002322093.1| predicted protein [Populus trichocarpa] gb|EEF06220.1| predicted protein [Populus trichocarpa] | 55.8 | 2e-06 |
| Manihot esculenta | blastn | - | - | - |
| FGENESH CDS | blastn | - | - | - |
| Arabidopsis thaliana | blastx | - | - | - |
| Populus trichocarpa | blastx | POPTR_0015s04380.1|PACid:18233390 | 55.8 | 2e-08 |
| Vitis vinifera | blastx | - | - | - |
| Ricinus communis | blastx | - | - | - |
| InterProScan |
| No hits found |
| Sequence: CAS01_014_P07.r_2_ORF2 Length: 55 aa | |
| No hits reported. | |
| Sequence: CAS01_014_P07.r_3_ORF2 Length: 52 aa | |
| No hits reported. | |
| Sequence: CAS01_014_P07.r_5_ORF2 Length: 52 aa | |
| No hits reported. | |
| Sequence: CAS01_014_P07.r_6_ORF2 Length: 111 aa | |
| No hits reported. | |
