Summary
| Sequence ID | CAS01_009_D03.r (DB941435) | |
| Sequence Length | 447 nucleotides | |
| Gbrowse Mes | ||
| Gbrowse Rco | - | |
| Gbrowse Ptr | - | |
| Gbrowse Vvi | - | |
| Gbrowse Ath | - | |
| Transcript scaffold composed of the full-length cDNA(s) | Scaffold01949 | |
| Related probe ID of RIKEN ver.1 microarray | R_Mes01_001499 (Scaffold01949) |
| >CAS01_009_D03.r AGAGTGGGTTTCAGTCCCATCTTCATCTCCAAAGTCAGAATTATGGTCTAACAAGGAAGTGGAATCAAGATTCGATTGGT CCTCTTTGTCATATTCACCGTCACCGGCAGAGAGACTCCGGCAGCTGGGGAGTGATCAAGGCTGCAATTGGTCTTTTTCT GAGAGTTGGGTCACTGTAAGGTGAATTCAAAACCAACAATTCAGAATATTTTTTTAATTCTTCTGGTCACATTCTAACTA TTGAGATTCCAATGATTTTCAATGGTGAAGAGTGATAAATTTTTGGCGATTGTAAATGGATAGGAAGACAGAGGGAAATT GTATTTAGCAGATGAGTTTTAGATGATTGAATAGCCGTGATTGGTGGCCGTGAGTGGCCAAAGTGTACAGAATATTTCTT TCTTAAAACCCCTTTTATTGAAATACAGAGAAAATTACTTTCCCGAG |
| vs DB | Program | Description | Score | |
|---|---|---|---|---|
| NCBI nr | blastx | ref|XP_002523600.1| ATP binding protein, putative [Ricinus communis] gb|EEF38795.1| ATP binding protein, putative [Ricinus communis] | 94.7 | 4e-18 |
| Manihot esculenta | blastn | - | - | - |
| FGENESH CDS | blastn | - | - | - |
| Arabidopsis thaliana | blastx | - | - | - |
| Populus trichocarpa | blastx | POPTR_0007s10930.1|PACid:18242944 | 63.9 | 5e-11 |
| Vitis vinifera | blastx | GSVIVT01022117001|PACid:17831030 | 56.2 | 6e-09 |
| Ricinus communis | blastx | 30115.m001222|PACid:16818001 | 94.7 | 2e-20 |
| InterProScan |
| No hits found |
| Sequence: CAS01_009_D03.r_2_ORF1 Length: 60 aa | |
| No hits reported. | |
| Sequence: CAS01_009_D03.r_3_ORF1 Length: 58 aa | |
| No hits reported. | |
| Sequence: CAS01_009_D03.r_5_ORF1 Length: 72 aa | |
| No hits reported. | |
