Sequence ID | BM260210 | |
Sequence Length | 597 nucleotides | |
Gbrowse Mes | ||
Gbrowse Rco | Mapped | |
Gbrowse Ptr | Mapped | |
Gbrowse Vvi | - | |
Gbrowse Ath | - | |
Corresponding scaffold | - | |
Related probe ID of RIKEN ver.1 microarray | R_Mes01_013525 (BM260210) |
>BM260210 GAATTTTGCATTTCACATTTGAACGTAAGATTACAAATAAAAGCAGTTAATTAGCATGAAGAAAAAGAGAGCGAGCAGAA TGATACCCTATGTTTGTCTCCAACAGTATGTTATCTGAATAAATACAATTTCCAAATTGTAAAAAACCCACTTAGAGGGG GCTCTCCATAGTGCCGCATATAAGAAATATCCTTGCAAAAATCAGAGAGCATGTACTTCACGATCACTTCCAACTATGCC AATGCACCTTGAAGCACATATGCTGTCACTCCTCAACAGGCTACGGCTGCTACACTTGGGTTTGGTAGAGCTGGTTTGCA TAGCTACTGCATTTCTGTTTGCAGATTCCAATCCTTCAGTTGATTCTGATTTTTCAGGACTTTGTTGAGTTGCACGGGTA ACAGATGCTGAACTACGCTTTATGACGATATCAGTTTCATCAATTGTACAGATTCGCTCCCTGGGCAACGAGGTGGCATG CTTCCTATGGAGAGGACTGATTCTATCACTTCTACCATTTCCTTCCTCAAGATGTGCAAATTGTTCCTTAAATCGGTCAA TTCCACTTGGATACACAAAGTGAGTCTGATCTGTTCC |
vs DB | Program | Description | Score | |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002526023.1| big map kinase/bmk, putative [Ricinus communis] gb|EEF36363.1| big map kinase/bmk, putative [Ricinus communis] | 218 | 3e-55 |
Manihot esculenta | blastn | cassava4.1_006340m|PACid:17970437 | 777 | 0.0 |
FGENESH CDS | blastn | scaffold04251_FGENESH7 9 exon (s) 60973 - 65036 1476 bp, chain + | 777 | 0.0 |
Arabidopsis thaliana | blastx | AT2G01450.4 | Symbols: ATMPK17, MPK17 | MAP kinase 17 | chr2:199722-202010 REVERSE LENGTH=486 | 89.0 | 2e-18 |
Populus trichocarpa | blastx | POPTR_0010s12240.2|PACid:18239798 | 216 | 1e-56 |
Vitis vinifera | blastx | GSVIVT01011749001|PACid:17823534 | 120 | 5e-28 |
Ricinus communis | blastx | 29816.m000682|PACid:16809594 | 218 | 1e-57 |
InterProScan |
No hits found |
Sequence: BM260210_1_ORF2 Length: 62 aa | |
No hits reported. |
Sequence: BM260210_2_ORF2 Length: 81 aa | |||||||
noIPR unintegrated |
|
Sequence: BM260210_2_ORF3 Length: 64 aa | |
No hits reported. |
Sequence: BM260210_3_ORF2 Length: 50 aa | |
No hits reported. |
Sequence: BM260210_4_ORF1 Length: 131 aa | |
No hits reported. |
Sequence: BM260210_6_ORF1 Length: 58 aa | |||||||
noIPR unintegrated |
|