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Summary
Sequence ID BM260210
Sequence Length 597 nucleotides
Gbrowse Mes 
Gbrowse Rco  Mapped
Gbrowse Ptr  Mapped
Gbrowse Vvi  -
Gbrowse Ath  -
Corresponding scaffold  -
Related probe ID of RIKEN ver.1 microarray  R_Mes01_013525 (BM260210)
 
 
Sequence
>BM260210
GAATTTTGCATTTCACATTTGAACGTAAGATTACAAATAAAAGCAGTTAATTAGCATGAAGAAAAAGAGAGCGAGCAGAA
TGATACCCTATGTTTGTCTCCAACAGTATGTTATCTGAATAAATACAATTTCCAAATTGTAAAAAACCCACTTAGAGGGG
GCTCTCCATAGTGCCGCATATAAGAAATATCCTTGCAAAAATCAGAGAGCATGTACTTCACGATCACTTCCAACTATGCC
AATGCACCTTGAAGCACATATGCTGTCACTCCTCAACAGGCTACGGCTGCTACACTTGGGTTTGGTAGAGCTGGTTTGCA
TAGCTACTGCATTTCTGTTTGCAGATTCCAATCCTTCAGTTGATTCTGATTTTTCAGGACTTTGTTGAGTTGCACGGGTA
ACAGATGCTGAACTACGCTTTATGACGATATCAGTTTCATCAATTGTACAGATTCGCTCCCTGGGCAACGAGGTGGCATG
CTTCCTATGGAGAGGACTGATTCTATCACTTCTACCATTTCCTTCCTCAAGATGTGCAAATTGTTCCTTAAATCGGTCAA
TTCCACTTGGATACACAAAGTGAGTCTGATCTGTTCC

 
 
BLAST results
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002526023.1| big map kinase/bmk, putative [Ricinus communis] gb|EEF36363.1| big map kinase/bmk, putative [Ricinus communis] 218 3e-55
  Manihot esculenta blastn  cassava4.1_006340m|PACid:17970437 777 0.0
  FGENESH CDS blastn  scaffold04251_FGENESH7 9 exon (s) 60973 - 65036 1476 bp, chain + 777 0.0
  Arabidopsis thaliana blastx  AT2G01450.4 | Symbols: ATMPK17, MPK17 | MAP kinase 17 | chr2:199722-202010 REVERSE LENGTH=486 89.0 2e-18
  Populus trichocarpa blastx  POPTR_0010s12240.2|PACid:18239798 216 1e-56
  Vitis vinifera blastx  GSVIVT01011749001|PACid:17823534 120 5e-28
  Ricinus communis blastx  29816.m000682|PACid:16809594 218 1e-57
 
 
Gene Ontology 
InterProScan
No hits found
 
 
InterProScan result 
Sequence: BM260210_1_ORF2  Length: 62 aa
No hits reported.
Sequence: BM260210_2_ORF2  Length: 81 aa
noIPR
unintegrated
unintegrated
seg[41-57]? NA seg segseg
Sequence: BM260210_2_ORF3  Length: 64 aa
No hits reported.
Sequence: BM260210_3_ORF2  Length: 50 aa
No hits reported.
Sequence: BM260210_4_ORF1  Length: 131 aa
No hits reported.
Sequence: BM260210_6_ORF1  Length: 58 aa
noIPR
unintegrated
unintegrated
coil[13-34]? NA coil coiled-coilcoiled-coil