Probe sequence ID | R_Mes01_009092 | |
Target sequence ID | Scaffold11469 | |
Sequence composing scaffold | ||
Probe sequence length | 60 nucleotides | |
Probe sequence | >R_Mes01_009092|Scaffold11469 GATGCCAGGAAAGAACAGTTTTGGTCTGAAGAGTGGTATTTTCTTAATGTAATGATTGTT |
vs DB | Program | Description | Score | E value |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002534166.1| big map kinase/bmk, putative [Ricinus communis] gb|EEF28215.1| big map kinase/bmk, putative [Ricinus communis] | 132 | 5e-30 |
Manihot esculenta | blastn | cassava4.1_003987m|PACid:17986942 | 809 | 0.0 |
FGENESH CDS | blastn | scaffold02572_FGENESH2 11 exon (s) 7316 - 13275 1485 bp, chain - | 601 | 1e-171 |
Arabidopsis thaliana | blastx | AT1G18150.3 | Symbols: ATMPK8 | Protein kinase superfamily protein | chr1:6244641-6247582 REVERSE LENGTH=589 | 95.9 | 5e-21 |
Populus trichocarpa | blastx | POPTR_0015s04380.1|PACid:18233390 | 122 | 1e-28 |
Vitis vinifera | blastx | GSVIVT01008408001|PACid:17821014 | 93.2 | 1e-20 |
Ricinus communis | blastx | 28097.m000052|PACid:16799928 | 132 | 2e-32 |
vs DB | Program | Description | Score | E value |
---|---|---|---|---|
NCBI nr | blastx | ef|XP_002322093.1| predicted protein [Populus trichocarpa] >gi|... 60 2e-07 >ref|XP_002322093.1| predicted protein [Populus trichocarpa] gb|EEF06220.1| predicted protein [Populus trichocarpa] | 60.1 | 2e-07 |
Manihot esculenta | blastn | - | - | - |
FGENESH CDS | blastn | - | - | - |
Arabidopsis thaliana | blastx | AT1G18150.3 | Symbols: ATMPK8 | Protein kinase superfamily protein | chr1:6244641-6247582 REVERSE LENGTH=589 | 57.8 | 5e-09 |
Populus trichocarpa | blastx | POPTR_0015s04380.1|PACid:18233390 | 60.1 | 1e-09 |
Vitis vinifera | blastx | GSVIVT01008408001|PACid:17821014 | 50.8 | 4e-07 |
Ricinus communis | blastx | 28097.m000052|PACid:16799928 | 52.4 | 1e-07 |