Probe sequence ID | R_Mes01_008261 | |
Target sequence ID | Scaffold10628 | |
Sequence composing scaffold | ||
Probe sequence length | 60 nucleotides | |
Probe sequence | >R_Mes01_008261|Scaffold10628 GAATCCCAGTTACAGAGCAGAAATTATTCCATAATGGGAAGCAACTAGATCAGTGTCTTC |
vs DB | Program | Description | Score | E value |
---|---|---|---|---|
NCBI nr | blastx | emb|CBI33105.3| unnamed protein product [Vitis vinifera] | 86.7 | 2e-15 |
Manihot esculenta | blastn | - | - | - |
FGENESH CDS | blastn | scaffold11499_FGENESH3 2 exon (s) 55490 - 57172 1545 bp, chain + | 813 | 0.0 |
Arabidopsis thaliana | blastx | AT4G12570.1 | Symbols: UPL5 | ubiquitin protein ligase 5 | chr4:7445585-7448819 FORWARD LENGTH=873 | 69.3 | 2e-12 |
Populus trichocarpa | blastx | POPTR_0016s05980.1|PACid:18250155 | 72.0 | 3e-13 |
Vitis vinifera | blastx | GSVIVT01003328001|PACid:17818430 | 86.7 | 7e-18 |
Ricinus communis | blastx | 29206.m000140|PACid:16802454 | 79.3 | 1e-15 |
vs DB | Program | Description | Score | E value |
---|---|---|---|---|
NCBI nr | blastx | ref|XP_002527852.1| conserved hypothetical protein [Ricinus communis] gb|EEF34555.1| conserved hypothetical protein [Ricinus communis] | 112 | 3e-23 |
Manihot esculenta | blastn | cassava4.1_023677m|PACid:17986575 | 420 | 1e-117 |
FGENESH CDS | blastn | scaffold09809_FGENESH19 4 exon (s) 474932 - 477234 882 bp, chain + | 420 | 1e-117 |
Arabidopsis thaliana | blastx | AT4G12020.2 | Symbols: WRKY19, ATWRKY19, MAPKKK11, MEKK4 | protein kinase family protein | chr4:7201656-7209469 FORWARD LENGTH=1895 | 87.0 | 5e-18 |
Populus trichocarpa | blastx | POPTR_0002s08950.1|PACid:18245706 | 90.5 | 5e-19 |
Vitis vinifera | blastx | GSVIVT01023037001|PACid:17831649 | 96.7 | 4e-21 |
Ricinus communis | blastx | 29609.m000604|PACid:16803633 | 112 | 1e-25 |