Home > Microarray > Keyword search > R_Mes01_004434

Summary
Probe sequence ID R_Mes01_004434
Target sequence ID Scaffold05684
Sequence composing scaffold 
Probe sequence length 60 nucleotides
Probe sequence
>R_Mes01_004434|Scaffold05684
TAGTCCTTTTGTGGGTACACAGAGGACATGGTGATATAACGTTCAATGCGAGGTCAAGGA
 
 
BLAST results
Query ID: CAS01_032_K15.f
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002529731.1| mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative [Ricinus communis] gb|EEF32660.1| mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative [Ricinus communis] 167 6e-49
  Manihot esculenta blastn  cassava4.1_005325m|PACid:17973662 882 0.0
  FGENESH CDS blastn  scaffold06948_FGENESH71 12 exon (s) 692141 - 696652 2208 bp, chain - 755 0.0
  Arabidopsis thaliana blastx  AT1G53570.1 | Symbols: MAP3KA, MAPKKK3 | mitogen-activated protein kinase kinase kinase 3 | chr1:19987391-19990733 FORWARD LENGTH=609 77.8 1e-15
  Populus trichocarpa blastx  POPTR_0007s04070.1|PACid:18243224 128 2e-33
  Vitis vinifera blastx  GSVIVT01026487001|PACid:17834182 107 7e-29
  Ricinus communis blastx  29691.m000286|PACid:16805903 167 2e-51

Query ID: Contig04687
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002529731.1| mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative [Ricinus communis] gb|EEF32660.1| mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative [Ricinus communis] 395 1e-108
  Manihot esculenta blastn  cassava4.1_005325m|PACid:17973662 995 0.0
  FGENESH CDS blastn  scaffold06948_FGENESH71 12 exon (s) 692141 - 696652 2208 bp, chain - 995 0.0
  Arabidopsis thaliana blastx  AT1G53570.4 | Symbols: MAP3KA | mitogen-activated protein kinase kinase kinase 3 | chr1:19987391-19990733 FORWARD LENGTH=608 367 1e-102
  Populus trichocarpa blastx  POPTR_0005s06330.1|PACid:18208825 383 1e-107
  Vitis vinifera blastx  GSVIVT01026487001|PACid:17834182 373 1e-104
  Ricinus communis blastx  29691.m000286|PACid:16805903 395 1e-111