Home > Microarray > Keyword search > R_Mes01_002018

Summary
Probe sequence ID R_Mes01_002018
Target sequence ID Scaffold02634
Sequence composing scaffold 
Probe sequence length 60 nucleotides
Probe sequence
>R_Mes01_002018|Scaffold02634
GAGTTCTTAGCGGATTGTGAAGTTGGTTTATTTGGATAAGGAAGATATTCACAAGATCAA
 
 
BLAST results
Query ID: Contig02045
vs DB Program Description Score E value
  NCBI nr blastx  ef|XP_002306886.1| predicted protein [Populus trichocarpa] >gi|... 88 1e-15 >ref|XP_002306886.1| predicted protein [Populus trichocarpa] gb|EEE93882.1| predicted protein [Populus trichocarpa] 87.8 1e-15
  Manihot esculenta blastn - - -
  FGENESH CDS blastn - - -
  Arabidopsis thaliana blastx  AT1G59580.2 | Symbols: ATMPK2, MPK2 | mitogen-activated protein kinase homolog 2 | chr1:21884521-21885743 FORWARD LENGTH=376 84.0 8e-17
  Populus trichocarpa blastx  POPTR_0005s25270.2|PACid:18208046 87.8 6e-18
  Vitis vinifera blastx - - -
  Ricinus communis blastx  30170.m013789|PACid:16821634 85.5 2e-17

Query ID: Contig02046
vs DB Program Description Score E value
  NCBI nr blastx  dbj|BAE96757.1| MAP kinase homolog [Nicotiana tabacum] 69.7 1e-19
  Manihot esculenta blastn  cassava4.1_009941m|PACid:17969422 430 1e-120
  FGENESH CDS blastn  scaffold10524_FGENESH19 2 exon (s) 174185 - 177150 1119 bp, chain + 430 1e-120
  Arabidopsis thaliana blastx  AT1G10210.2 | Symbols: ATMPK1, MPK1 | mitogen-activated protein kinase 1 | chr1:3349579-3350776 FORWARD LENGTH=370 77.8 6e-15
  Populus trichocarpa blastx  POPTR_0005s25270.2|PACid:18208046 84.0 1e-16
  Vitis vinifera blastx  GSVIVT01018883001|PACid:17828686 69.7 9e-21
  Ricinus communis blastx  30170.m013789|PACid:16821634 87.8 4e-18