Home > Microarray > Keyword search > R_Mes01_001981

Summary
Probe sequence ID R_Mes01_001981
Target sequence ID Scaffold02586
Sequence composing scaffold 
Probe sequence length 60 nucleotides
Probe sequence
>R_Mes01_001981|Scaffold02586
CTTGTATACTCCTAAACAAGTGGAAAGCACCCTTATGTAAGAAATGTATAAGGATTTCAC
 
 
BLAST results
Query ID: Contig02000
vs DB Program Description Score E value
  NCBI nr blastx  ef|XP_002516865.1| Beta-amylase, putative [Ricinus communis] >g... 260 1e-67 >ref|XP_002516865.1| Beta-amylase, putative [Ricinus communis] gb|EEF45479.1| Beta-amylase, putative [Ricinus communis] 260 1e-67
  Manihot esculenta blastn  cassava4.1_005239m|PACid:17971438 1140 0.0
  FGENESH CDS blastn  scaffold09365_FGENESH20 3 exon (s) 148762 - 150940 1608 bp, chain - 1140 0.0
  Arabidopsis thaliana blastx  AT5G18670.1 | Symbols: BMY3, BAM9 | beta-amylase 3 | chr5:6226138-6227999 FORWARD LENGTH=536 207 6e-54
  Populus trichocarpa blastx  POPTR_0008s20870.1|PACid:18249324 246 2e-65
  Vitis vinifera blastx  GSVIVT01017808001|PACid:17827917 220 5e-58
  Ricinus communis blastx  29726.m003986|PACid:16806698 260 4e-70

Query ID: Contig02001
vs DB Program Description Score E value
  NCBI nr blastx  ef|XP_002516865.1| Beta-amylase, putative [Ricinus communis] >g... 62 4e-08 >ref|XP_002516865.1| Beta-amylase, putative [Ricinus communis] gb|EEF45479.1| Beta-amylase, putative [Ricinus communis] 61.6 4e-08
  Manihot esculenta blastn - - -
  FGENESH CDS blastn - - -
  Arabidopsis thaliana blastx - - -
  Populus trichocarpa blastx  POPTR_0008s20870.1|PACid:18249324 50.8 5e-07
  Vitis vinifera blastx - - -
  Ricinus communis blastx  29726.m003986|PACid:16806698 61.6 2e-10