Probe sequence ID | R_Mes01_001981 | |
Target sequence ID | Scaffold02586 | |
Sequence composing scaffold | ||
Probe sequence length | 60 nucleotides | |
Probe sequence | >R_Mes01_001981|Scaffold02586 CTTGTATACTCCTAAACAAGTGGAAAGCACCCTTATGTAAGAAATGTATAAGGATTTCAC |
vs DB | Program | Description | Score | E value |
---|---|---|---|---|
NCBI nr | blastx | ef|XP_002516865.1| Beta-amylase, putative [Ricinus communis] >g... 260 1e-67 >ref|XP_002516865.1| Beta-amylase, putative [Ricinus communis] gb|EEF45479.1| Beta-amylase, putative [Ricinus communis] | 260 | 1e-67 |
Manihot esculenta | blastn | cassava4.1_005239m|PACid:17971438 | 1140 | 0.0 |
FGENESH CDS | blastn | scaffold09365_FGENESH20 3 exon (s) 148762 - 150940 1608 bp, chain - | 1140 | 0.0 |
Arabidopsis thaliana | blastx | AT5G18670.1 | Symbols: BMY3, BAM9 | beta-amylase 3 | chr5:6226138-6227999 FORWARD LENGTH=536 | 207 | 6e-54 |
Populus trichocarpa | blastx | POPTR_0008s20870.1|PACid:18249324 | 246 | 2e-65 |
Vitis vinifera | blastx | GSVIVT01017808001|PACid:17827917 | 220 | 5e-58 |
Ricinus communis | blastx | 29726.m003986|PACid:16806698 | 260 | 4e-70 |
vs DB | Program | Description | Score | E value |
---|---|---|---|---|
NCBI nr | blastx | ef|XP_002516865.1| Beta-amylase, putative [Ricinus communis] >g... 62 4e-08 >ref|XP_002516865.1| Beta-amylase, putative [Ricinus communis] gb|EEF45479.1| Beta-amylase, putative [Ricinus communis] | 61.6 | 4e-08 |
Manihot esculenta | blastn | - | - | - |
FGENESH CDS | blastn | - | - | - |
Arabidopsis thaliana | blastx | - | - | - |
Populus trichocarpa | blastx | POPTR_0008s20870.1|PACid:18249324 | 50.8 | 5e-07 |
Vitis vinifera | blastx | - | - | - |
Ricinus communis | blastx | 29726.m003986|PACid:16806698 | 61.6 | 2e-10 |