Home > Microarray > Keyword search > R_Mes01_005477

Summary
Probe sequence ID R_Mes01_005477
Target sequence ID Scaffold06980
Sequence composing scaffold 
Probe sequence length 60 nucleotides
Probe sequence
>R_Mes01_005477|Scaffold06980
GGGAGGATTTTTTGGTGAATTTCTATGAAGGACCTCCATTTAAATTCAAGCTATCCCGCA
 
 
BLAST results
Query ID: CAS01_044_D17.f
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002533127.1| WD-repeat protein, putative [Ricinus communis] gb|EEF29254.1| WD-repeat protein, putative [Ricinus communis] 373 1e-102
  Manihot esculenta blastn  cassava4.1_003872m|PACid:17968086 1080 0.0
  FGENESH CDS blastn  scaffold06631_FGENESH32 10 exon (s) 299369 - 311477 2295 bp, chain - 1003 0.0
  Arabidopsis thaliana blastx  AT3G18060.1 | Symbols: | transducin family protein / WD-40 repeat family protein | chr3:6183880-6186788 FORWARD LENGTH=609 332 9e-92
  Populus trichocarpa blastx  POPTR_0015s04290.1|PACid:18232754 356 7e-99
  Vitis vinifera blastx  GSVIVT01008399001|PACid:17821006 332 6e-92
  Ricinus communis blastx  29924.m000096|PACid:16813696 373 1e-104

Query ID: Contig05821
vs DB Program Description Score E value
  NCBI nr blastx - - -
  Manihot esculenta blastn - - -
  FGENESH CDS blastn - - -
  Arabidopsis thaliana blastx - - -
  Populus trichocarpa blastx - - -
  Vitis vinifera blastx - - -
  Ricinus communis blastx - - -