Home > Microarray > Keyword search > R_Mes01_005476

Summary
Probe sequence ID R_Mes01_005476
Target sequence ID Scaffold06979
Sequence composing scaffold 
Probe sequence length 60 nucleotides
Probe sequence
>R_Mes01_005476|Scaffold06979
GCTCTTATCATGGGAGTCATTGGAATTGAGAGTAGTATAGAAATGATAAAGAATCATGAG
 
 
BLAST results
Query ID: Contig05820
vs DB Program Description Score E value
  NCBI nr blastx  ef|XP_002326235.1| predicted protein [Populus trichocarpa] >gi|... 250 1e-64 >ref|XP_002326235.1| predicted protein [Populus trichocarpa] gb|EEE71905.1| predicted protein [Populus trichocarpa] 250 1e-64
  Manihot esculenta blastn  cassava4.1_007299m|PACid:17975524 912 0.0
  FGENESH CDS blastn  scaffold10247_FGENESH1 12 exon (s) 2333 - 4965 1377 bp, chain + 912 0.0
  Arabidopsis thaliana blastx  AT2G36630.1 | Symbols: | Sulfite exporter TauE/SafE family protein | chr2:15352767-15355050 REVERSE LENGTH=459 223 8e-59
  Populus trichocarpa blastx  POPTR_0006s11920.1|PACid:18213888 250 7e-67
  Vitis vinifera blastx  GSVIVT01033741001|PACid:17839399 241 2e-64
  Ricinus communis blastx  29815.m000496|PACid:16809552 248 1e-66

Query ID: CAS01_016_N11.r
vs DB Program Description Score E value
  NCBI nr blastx  ref|NP_850267.1| Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana] gb|AAL77676.1| At2g36630/F1O11.26 [Arabidopsis thaliana] gb|AAM91463.1| At2g36630/F1O11.26 [Arabidopsis thaliana] gb|AEC09275.1| Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana] 101 5e-20
  Manihot esculenta blastn - - -
  FGENESH CDS blastn - - -
  Arabidopsis thaliana blastx  AT2G36630.1 | Symbols: | Sulfite exporter TauE/SafE family protein | chr2:15352767-15355050 REVERSE LENGTH=459 101 3e-22
  Populus trichocarpa blastx  POPTR_0006s11920.1|PACid:18213888 91.3 4e-19
  Vitis vinifera blastx  GSVIVT01033741001|PACid:17839399 92.4 1e-19
  Ricinus communis blastx  29815.m000496|PACid:16809552 97.1 4e-21