Home > Microarray > Keyword search > R_Mes01_001499

Summary
Probe sequence ID R_Mes01_001499
Target sequence ID Scaffold01949
Sequence composing scaffold 
Probe sequence length 60 nucleotides
Probe sequence
>R_Mes01_001499|Scaffold01949
ATCTCTGCTCCTTTAATGGCGGTGAAATCTTGTGATGTTTTTGAATCTTCTTTGCTTGAG
 
 
BLAST results
Query ID: Contig01469
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002523600.1| ATP binding protein, putative [Ricinus communis] gb|EEF38795.1| ATP binding protein, putative [Ricinus communis] 238 4e-61
  Manihot esculenta blastn  cassava4.1_020998m|PACid:17985420 898 0.0
  FGENESH CDS blastn  scaffold10453_FGENESH2 3 exon (s) 44212 - 45802 1188 bp, chain - 898 0.0
  Arabidopsis thaliana blastx  AT4G36950.1 | Symbols: MAPKKK21 | mitogen-activated protein kinase kinase kinase 21 | chr4:17422834-17423844 REVERSE LENGTH=336 176 1e-44
  Populus trichocarpa blastx  POPTR_0005s18230.1|PACid:18208980 199 1e-51
  Vitis vinifera blastx  GSVIVT01022117001|PACid:17831030 170 5e-43
  Ricinus communis blastx  30115.m001222|PACid:16818001 238 2e-63

Query ID: CAS01_009_D03.r
vs DB Program Description Score E value
  NCBI nr blastx  ref|XP_002523600.1| ATP binding protein, putative [Ricinus communis] gb|EEF38795.1| ATP binding protein, putative [Ricinus communis] 94.7 4e-18
  Manihot esculenta blastn - - -
  FGENESH CDS blastn - - -
  Arabidopsis thaliana blastx - - -
  Populus trichocarpa blastx  POPTR_0007s10930.1|PACid:18242944 63.9 5e-11
  Vitis vinifera blastx  GSVIVT01022117001|PACid:17831030 56.2 6e-09
  Ricinus communis blastx  30115.m001222|PACid:16818001 94.7 2e-20