| EST | mRNA | Note | |
|---|---|---|---|
| NCBI | 76566 | 86 | available from NCBI as of 25 Dec 2008 |
| Cleaned | 76482 | 86 | elimination of vector and E. coli sequence by cross_match |
| Total | 76568 | for assembling |
| Contig | Singlet | Total |
|---|---|---|
| 11422 | 18214 | 29636 |
| Subject | Program | Hits | No hits | Total | Entries in subject | Version |
|---|---|---|---|---|---|---|
| Viridiplantae protein (TAIR) | blastx | 22606 | 7030 | 29636 | 546608 | 18 Dec 2007 |
| UniProt TrEMBL plant protein | blastx | 22879 | 6757 | 29636 | 576441 | 3 Mar 2009 |
| Ricinus communis protein | blastx | 15982 | 13654 | 29636 | 31221 | 12 Feb 2009 derived from the draft genome sequences |
| Populus trichocarpa protein (JGI) | blastx | 22929 | 6707 | 29636 | 45555 | JGI v1.1 |
| Vitis vinifera protein (IGGP) | blastx | 22045 | 7591 | 29636 | 30434 | IGGP v1 |
| Arabidopsis thaliana protein (TAIR) | blastx | 21631 | 8005 | 29636 | 32825 | 12 Apr 2008 TAIR8 |
| Viridiplantae mRNA (NCBI) | blastn | 12536 | 17100 | 29636 | 477134 | 4 Mar 2009 retrieved from NCBI |
| Subject | Mapped | Unmapped | Total | Entries in subject | Version |
|---|---|---|---|---|---|
| Ricinus communis (TIGR) | 18630 | 11006 | 29636 | 25762 | 12 Feb 2009 Scaffolds |
| Populus trichocarpa (JGI) | 15344 | 14292 | 29636 | 22012 | JGI v1.1 |
| Vitis vinifera (IGGP) | 10246 | 19390 | 29636 | 35 | IGGP v1 |
| Arabidopsis thaliana (TAIR) | 4220 | 25416 | 29636 | 7 | 24 Apr 2008 |
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| Last Modified : 03/10/2010 |
